RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MAN1A2O60476 641 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 OR6B1O95007 311 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 GSTM3P21266 225 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 MYF6P23409 242 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 MSX1P28360 303 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 PTGDSP41222 190 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 RBM34P42696 430 aaKnown RBP12.27□□□□□ -0.45
VMP1-217ENST00000593168 IDH2P48735 452 aaKnown RBP12.27□□□□□ -0.45
VMP1-217ENST00000593168 P2RX1P51575 399 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 RPS6KA3P51812 740 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 SUMO3P55854 103 aaPredicted RBP12.27□□□□□ -0.45
VMP1-217ENST00000593168 IL1RL1Q01638 556 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 SNTA1Q13424 505 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 CRTC2Q53ET0 693 aaPredicted RBP12.27□□□□□ -0.45
VMP1-217ENST00000593168 ALG10BQ5I7T1 473 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 FCRLBQ6BAA4 426 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 LINC00114Q6XXX2 140 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 GPALPP1Q8IXQ4 340 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 CADM2Q8N3J6 435 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 TMEM156Q8N614 296 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 TMCO5AQ8N6Q1 288 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 OR10G3Q8NGC4 313 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 B4GALNT2Q8NHY0 566 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 PIGXQ8TBF5 258 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 BRIX1Q8TDN6 353 aaKnown RBP12.27□□□□□ -0.45
VMP1-217ENST00000593168 GNPDA2Q8TDQ7 276 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 DUSP19Q8WTR2 217 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 CYGBQ8WWM9 190 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 THAP4Q8WY91 577 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 THOC3Q96J01 351 aaKnown RBP12.27□□□□□ -0.45
VMP1-217ENST00000593168 SGCZQ96LD1 299 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 PSMG3-AS1Q96PY0 264 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 NR1H4Q96RI1 486 aaPredicted RBP12.27□□□□□ -0.45
VMP1-217ENST00000593168 ZNF426Q9BUY5 554 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 UCK2Q9BZX2 261 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 GRIP2Q9C0E4 1043 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 C12orf10Q9HB07 376 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 SELENONQ9NZV5 590 aa12.27□□□□□ -0.45
VMP1-217ENST00000593168 A0A087WUJ7 227 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 LOC100130705A0A1B0GUX0 176 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 HTR3EA5X5Y0 456 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 PNMTP11086 282 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 PGCP20142 388 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 POLR2IP36954 125 aaKnown RBP12.26□□□□□ -0.45
VMP1-217ENST00000593168 CASP3P42574 277 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 SLC1A3P43003 542 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 OMPP47874 163 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 CCR4P51679 360 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 SOX8P57073 446 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 ESRRGP62508 458 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 NPRL3Q12980 569 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 IL18R1Q13478 541 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 CBFBQ13951 182 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 KEAP1Q14145 624 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 ACER2Q5QJU3 275 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 SLC30A6Q6NXT4 461 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 KLHL17Q6TDP4 642 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 IL20RBQ6UXL0 311 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 WDR88Q6ZMY6 472 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 PAQR8Q8TEZ7 354 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 TMEM255BQ8WV15 326 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 TMEM239Q8WW34 195 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 GTPBP3Q969Y2 492 aaKnown RBP12.26□□□□□ -0.45
VMP1-217ENST00000593168 C3orf49Q96BT1 292 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 NTNG2Q96CW9 530 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 SH3YL1Q96HL8 342 aaPredicted RBP12.26□□□□□ -0.45
VMP1-217ENST00000593168 CNBD2Q96M20 576 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 LHPPQ9H008 270 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 ADAM19Q9H013 955 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 RIBC2Q9H4K1 309 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 METTL7AQ9H8H3 244 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 SH2D2AQ9NP31 389 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 KRCC1Q9NPI7 259 aaPredicted RBP12.26□□□□□ -0.45
VMP1-217ENST00000593168 HPF1Q9NWY4 346 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 KLRF1Q9NZS2 232 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 TEKT2Q9UIF3 430 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 CHCHD2Q9Y6H1 151 aaPredicted RBP12.26□□□□□ -0.45
VMP1-217ENST00000593168 NBASA2RRP1 2371 aa12.26□□□□□ -0.45
VMP1-217ENST00000593168 ANKRD33BA6NCL7 494 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 ZNF891A8MT65 544 aaPredicted RBP12.25□□□□□ -0.45
VMP1-217ENST00000593168 NKX2-8O15522 239 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 OSMP13725 252 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 POU2F1P14859 743 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 GSSP48637 474 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 RRADP55042 308 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 DLX5P56178 289 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 CTBP2P56545 445 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 LSM11P83369 360 aaKnown RBP eCLIP12.25□□□□□ -0.45
VMP1-217ENST00000593168 ALDH6A1Q02252 535 aaKnown RBP12.25□□□□□ -0.45
VMP1-217ENST00000593168 PRKCDQ05655 676 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 TSPAN31Q12999 210 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 PDK3Q15120 406 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 C4orf17Q53FE4 359 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 SLC22A10Q63ZE4 541 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 B3GNTL1Q67FW5 361 aaPredicted RBP12.25□□□□□ -0.45
VMP1-217ENST00000593168 HIST2H2BCQ6DN03 193 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 TTC33Q6PID6 262 aaPredicted RBP12.25□□□□□ -0.45
VMP1-217ENST00000593168 RTL4Q6ZR62 310 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 NRMQ8IXM6 262 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms