RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	FAIM	Q9NVQ4	179 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	CUBN	O60494	3623 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	RTTN	Q86VV8	2226 aa		13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	FBN1	P35555	2871 aa	Known RBP	13.37	□□□□□ -0.27
SREBF1-222	ENST00000583732	CIB4	A0PJX0	185 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZNF724	A8MTY0	619 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	ETV2	O00321	342 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	CD5L	O43866	347 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	BCAS1	O75363	584 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	AK1	P00568	194 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	CREB1	P16220	341 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	CCNA2	P20248	432 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	RYK	P34925	604 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZNF83	P51522	516 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	NUDT6	P53370	316 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	CSNK2A1	P68400	391 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	CHRNE	Q04844	493 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	PDCD2	Q16342	344 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	MAPK14	Q16539	360 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	ARHGAP11B	Q3KRB8	267 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	ABLIM2	Q6H8Q1	611 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	TMPPE	Q6ZT21	453 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	EIF3M	Q7L2H7	374 aa	Known RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	ANKRD46	Q86W74	232 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	EIF1AD	Q8N9N8	165 aa	Known RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	SPATA3	Q8NHX4	192 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	TMEM234	Q8WY98	164 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	HTRA1	Q92743	480 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	CACNG6	Q9BXT2	260 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	BARX1	Q9HBU1	254 aa	Predicted RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	CTPS2	Q9NRF8	586 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	ACER3	Q9NUN7	267 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	EMC3	Q9P0I2	261 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	POU2F3	Q9UKI9	436 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	B3GALT5	Q9Y2C3	310 aa		13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	NOSIP	Q9Y314	301 aa	Known RBP	13.36	□□□□□ -0.27
SREBF1-222	ENST00000583732	IGHV4-30-2	A0A087WSY4	118 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	OR5H1	A6NKK0	313 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	DUXA	A6NLW8	204 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	CCT8L1P	A6NM43	557 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	RNF212B	A8MTL3	300 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	GPRIN2	O60269	458 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	CPSF4	O95639	269 aa	Known RBP	13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	OR12D1	P0DN82	309 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	SERPINB5	P36952	375 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	IFFO1	Q0D2I5	559 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	AGAP6	Q5VW22	663 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	DNM1P46	Q6ZS02	220 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	DTX2	Q86UW9	622 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	RIBC1	Q8N443	379 aa	Predicted RBP	13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	RAB8B	Q92930	207 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZHX1-C8orf76	Q96EF9	292 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	PKNOX2	Q96KN3	472 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	OR11A1	Q9GZK7	315 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZNF350	Q9GZX5	532 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	EXD2	Q9NVH0	621 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	CAD	P27708	2225 aa		13.35	□□□□□ -0.27
SREBF1-222	ENST00000583732	FBN3	Q75N90	2809 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	ZNF716	A6NP11	495 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732		E7EQL1	145 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732		M0R1B8	84 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	TLX2	O43763	284 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	KIAA0513	O60268	411 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	BPGM	P07738	259 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	THBS1	P07996	1170 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	PGM1	P36871	562 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	FOXG1	P55316	489 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	CLDN8	P56748	225 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	OR2B6	P58173	313 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	IRX1	P78414	480 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	EMX2	Q04743	252 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	MAD2L1	Q13257	205 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	ATAD3B	Q5T9A4	648 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	C9orf135	Q5VTT2	229 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	FBXW9	Q5XUX1	488 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	TYW3	Q6IPR3	259 aa	Known RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	SLC22A25	Q6T423	547 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	B3GLCT	Q6Y288	498 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	MTDH	Q86UE4	582 aa	Known RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	XAGE5	Q8WWM1	108 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	APH1A	Q96BI3	265 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	ARL5B	Q96KC2	179 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	ADAD1	Q96M93	576 aa	Known RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	RHNO1	Q9BSD3	238 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	C1QTNF6	Q9BXI9	259 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	NOP53	Q9NZM5	478 aa	Known RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	LGALS13	Q9UHV8	139 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	PCDHGB4	Q9UN71	923 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	WDR45	Q9Y484	360 aa		13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	SPIN1	Q9Y657	262 aa	Predicted RBP	13.34	□□□□□ -0.27
SREBF1-222	ENST00000583732	WDR91	A4D1P6	747 aa		13.33	□□□□□ -0.28
SREBF1-222	ENST00000583732	CLDN24	A6NM45	220 aa		13.33	□□□□□ -0.28
SREBF1-222	ENST00000583732	ITM2A	O43736	263 aa		13.33	□□□□□ -0.28
SREBF1-222	ENST00000583732	DNAJA2	O60884	412 aa		13.33	□□□□□ -0.28
SREBF1-222	ENST00000583732	PGM3	O95394	542 aa		13.33	□□□□□ -0.28
SREBF1-222	ENST00000583732	APOBEC1	P41238	236 aa	Known RBP	13.33	□□□□□ -0.28

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