RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SYT14P1Q58G82 188 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 KLHL24Q6TFL4 600 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 UGT2A3Q6UWM9 527 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 FRMD7Q6ZUT3 714 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 ZNF572Q7Z3I7 529 aaPredicted RBP11.71□□□□□ -0.53
COPS3-214ENST00000577246 SLC46A3Q7Z3Q1 461 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 OR56A1Q8NGH5 318 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 ACMSDQ8TDX5 336 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 ZFAND2BQ8WV99 257 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 FBXO17Q96EF6 278 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 TSSK3Q96PN8 268 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 FMO2Q99518 471 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 PARPBPQ9NWS1 579 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 UPB1Q9UBR1 384 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 DCTN4Q9UJW0 460 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.543e-6■■■■■ 46.6
COPS3-214ENST00000577246 A0A0A6YYJ9 748 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 IGHV4-61A0A0C4DH41 118 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 SLCO1B7G3V0H7 640 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 ANKRD28O15084 1053 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 ERCC1P07992 297 aaPredicted RBP11.7□□□□□ -0.54
COPS3-214ENST00000577246 TFPIP10646 304 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 SDC1P18827 310 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 PGCP20142 388 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 PAX7P23759 505 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 CFPP27918 469 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 HPCAL1P37235 193 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 MAGEA8P43361 318 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 SLC16A1P53985 500 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 CKAP4Q07065 602 aaKnown RBP11.7□□□□□ -0.54
COPS3-214ENST00000577246 MERTKQ12866 999 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 SCGB2A2Q13296 93 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 SWI5Q1ZZU3 235 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 NDUFAF6Q330K2 333 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.7□□□□□ -0.54
COPS3-214ENST00000577246 BHLHB9Q6PI77 547 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 MOAP1Q96BY2 351 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 FOXN4Q96NZ1 517 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 SORCS2Q96PQ0 1159 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 KCNS3Q9BQ31 491 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 C1QTNF6Q9BXI9 259 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 NMUR2Q9GZQ4 415 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 ADAM19Q9H013 955 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 ANKZF1Q9H8Y5 726 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 SLC17A5Q9NRA2 495 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 CCL27Q9Y4X3 112 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 CADP27708 2225 aa11.7□□□□□ -0.54
COPS3-214ENST00000577246 NPIPA5A0A0B4J1W7 369 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 SERINC4A6NH21 518 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 ZNF716A6NP11 495 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 NPIPA7E9PJI5 369 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 ATP6V1G2-DDX39BF2Z307 99 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 NPIPB9F8W1W9 429 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 CYP7B1O75881 506 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 SNUPNO95149 360 aaKnown RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 PMS2P2O95744 297 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 CHEK2O96017 543 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 ITGA5P08648 1049 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 NPIPA8P0DM63 369 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 ITGA2P17301 1181 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 APOBEC1P41238 236 aaKnown RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 CCT3P49368 545 aaKnown RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 RNF144AP50876 292 aaPredicted RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 CHN2P52757 468 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 SESN3P58005 492 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 PRPS1P60891 318 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 TP53BP2Q13625 1128 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 CASP12Q6UXS9 341 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 ZYG11AQ6WRX3 759 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 NATD1Q8N6N6 113 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 HPS1Q92902 700 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 FCRL1Q96LA6 429 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 THUMPD3Q9BV44 507 aaKnown RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 BPESC1Q9GZL8 116 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 LAT2Q9GZY6 243 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 QRSL1Q9H0R6 528 aaKnown RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 SIRT3Q9NTG7 399 aaPredicted RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 DCDC2Q9UHG0 476 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 TMEFF2Q9UIK5 374 aaPredicted RBP11.69□□□□□ -0.54
COPS3-214ENST00000577246 SLC9A8Q9Y2E8 581 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 HDGFL3Q9Y3E1 203 aa11.69□□□□□ -0.54
COPS3-214ENST00000577246 DUXAA6NLW8 204 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 TMEM114B3SHH9 223 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 B9A039 149 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 DNAJA2O60884 412 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 PDE5AO76074 875 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 AK1P00568 194 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 SERPINF1P36955 418 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 CLK1P49759 484 aaKnown RBP11.68□□□□□ -0.54
COPS3-214ENST00000577246 RPL38P63173 70 aaKnown RBP11.68□□□□□ -0.54
COPS3-214ENST00000577246 SKP2Q13309 424 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 MST1LQ2TV78 715 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 LSM12Q3MHD2 195 aaKnown RBP11.68□□□□□ -0.54
COPS3-214ENST00000577246 PDZK1Q5T2W1 519 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 RNF165Q6ZSG1 346 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 EIF3MQ7L2H7 374 aaKnown RBP11.68□□□□□ -0.54
COPS3-214ENST00000577246 LINC01356Q8N9X3 169 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms