RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 UCN3Q969E3 161 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 ARPC5LQ9BPX5 153 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 DNTTIP1Q9H147 329 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 APMAPQ9HDC9 416 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SIDT1Q9NXL6 827 aaKnown RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF443Q9Y2A4 671 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 PHLPP1O60346 1717 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 CACNA1CQ13936 2221 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 RAD1O60671 282 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 IFNA17P01571 189 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 HLA-AP01891 365 aaKnown RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 FPR3P25089 353 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC6A12P48065 614 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 RPS15AP62244 130 aaKnown RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR1Q1Q15612 314 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 CHRFAM7AQ494W8 412 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 CCSMST1Q4G0I0 132 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF385BQ569K4 471 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 LIPIQ6XZB0 460 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 LNX2Q8N448 690 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 ELP5Q8TE02 316 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 FOXRED1Q96CU9 486 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 KLHL15Q96M94 604 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 RBP7Q96R05 134 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 UBQLN3Q9H347 655 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 HRH4Q9H3N8 390 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SEMA4GQ9NTN9 838 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 TOGARAM1Q9Y4F4 1720 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 GIPP09681 153 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SEC61A1P61619 476 aaKnown RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 FLI1Q01543 452 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 ARHGAP19Q14CB8 494 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 CCNJQ5T5M9 372 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC35F3Q8IY50 421 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR5T3Q8NGG3 340 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF587Q96SQ5 575 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF649Q9BS31 505 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 URM1Q9BTM9 101 aaKnown RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 PDFQ9HBH1 243 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 TMEM82A0PJX8 343 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 H3BQ06 376 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 SYT5O00445 386 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 SCO2O43819 266 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 HIST1H1TP22492 207 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC6A11P48066 632 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRPS1P60891 318 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 ELAVL3Q14576 367 aaKnown RBP12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 SSX1Q16384 188 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRRT3Q5FWE3 981 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 ALG1LQ6GMV1 187 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 CYHR1Q6ZMK1 362 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR14A2Q96R54 314 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRRT1Q99946 306 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 A0A087WUU8 490 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 ARRDC5A6NEK1 342 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 PEX11BO96011 259 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 OPRD1P41143 372 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 CLLU1Q5K131 121 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 A0A1B0GV50 99 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 CRMP1Q14194 572 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 GBX1Q14549 363 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 PEA15Q15121 130 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC18B1Q6NT16 456 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 PGAP1Q75T13 922 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 RNF113BQ8IZP6 322 aaKnown RBP12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 ESX1Q8N693 406 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 LSMEM1Q8N8F7 131 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 MYLIPQ8WY64 445 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 RAB7BQ96AH8 199 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 SEC22AQ96IW7 307 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 ARHGAP9Q9BRR9 750 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 PITHD1Q9GZP4 211 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 CWH43Q9H720 699 aa12.24□□□□□ -0.45
PCDHGB3-201ENST00000576222 HSPA12AO43301 675 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 HCRTR2O43614 444 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR2T7P0C7T2 308 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 HEPHL1Q6MZM0 1159 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRSS42Q7Z5A4 293 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 BPIFB2Q8N4F0 458 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR2T27Q8NH04 317 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 LINC01599Q8WXQ3 324 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 TM4SF18Q96CE8 201 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 NOX4Q9NPH5 578 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF701Q9NV72 531 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 SGK494L7N484 410 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLCO2B1O94956 709 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 TIMP2P16035 220 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 PSMB5P28074 263 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 CRYBB2P43320 205 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 DYRK1AQ13627 763 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 FAM209AQ5JX71 171 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 AVPI1Q5T686 147 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 CD163Q86VB7 1156 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 APH1BQ8WW43 257 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC25A44Q96H78 314 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 VRK1Q99986 396 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 IGLON5A6NGN9 336 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 GGT3PA6NGU5 568 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms