RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PDZD2O15018 2839 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 CCDC168Q8NDH2 2452 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 ELOVL7A1L3X0 281 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 CLCA1A8K7I4 914 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 M0QX08 132 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 EBAG9O00559 213 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 SEC14L5O43304 696 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 BCAS1O75363 584 aaPredicted RBP9.93□□□□□ -0.82
CHD3-216ENST00000573936 MFN2O95140 757 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 C8BP07358 591 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 PRF1P14222 555 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 GRNP28799 593 aaKnown RBP9.93□□□□□ -0.82
CHD3-216ENST00000573936 SLC1A3P43003 542 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 MAP2K6P52564 334 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 ADORA2A-AS1P86434 159 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 MERTKQ12866 999 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 SGCBQ16585 318 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 EEF1A1P5Q5VTE0 462 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 C3orf33Q6P1S2 294 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 C8orf82Q6P1X6 216 aaPredicted RBP9.93□□□□□ -0.82
CHD3-216ENST00000573936 MYO7BQ6PIF6 2116 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 P4HA3Q7Z4N8 544 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 ADGRE4PQ86SQ3 457 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 SLC15A3Q8IY34 581 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 UBQLNLQ8IYU4 475 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 MICU2Q8IYU8 434 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 MARVELD2Q8N4S9 558 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 TNIP2Q8NFZ5 429 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 OR2T12Q8NG77 320 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 SLC25A43Q8WUT9 341 aaPredicted RBP9.93□□□□□ -0.82
CHD3-216ENST00000573936 WNT2BQ93097 391 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 NSL1Q96IY1 281 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 KLHL15Q96M94 604 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 ZFP3Q96NJ6 502 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 NPAS1Q99742 590 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 TM9SF2Q99805 663 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 KLHDC3Q9BQ90 382 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 RLIMQ9NVW2 624 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 CMTM6Q9NX76 183 aa9.93□□□□□ -0.82
CHD3-216ENST00000573936 PCNX1Q96RV3 2341 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 MBD3L4A6NDZ8 208 aaPredicted RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 MBD3L3A6NE82 208 aaPredicted RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 MBD3L5A6NJ08 208 aaPredicted RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 SYT5O00445 386 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 EIF1AYO14602 144 aaKnown RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 ADAMDEC1O15204 470 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 SYNGR4O95473 234 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 GKN3PP0CG01 181 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 AQP1P29972 269 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 CHRNB4P30926 498 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 CEACAM8P31997 349 aaPredicted RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 ACAA2P42765 397 aaKnown RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 CLK1P49759 484 aaKnown RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 POLR2HP52434 150 aaKnown RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 SLC7A2P52569 658 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 SUCLG1P53597 346 aaKnown RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 CLDN15P56746 228 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 CLDN20P56880 219 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 CARD18P57730 90 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 PSME3P61289 254 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 MXRA7P84157 204 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 PLAURQ03405 335 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 LIPEQ05469 1076 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 BNIP1Q12981 228 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 TMEM176BQ3YBM2 270 aaPredicted RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 HBMQ6B0K9 141 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 WBP2NLQ6ICG8 309 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 C16orf89Q6UX73 402 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 GGNQ86UU5 652 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 RPRMLQ8N4K4 120 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 OR2V1Q8NHB1 315 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 MBD3L2Q8NHZ7 208 aaPredicted RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 ITLN2Q8WWU7 325 aaPredicted RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 SDCCAG3Q96C92 435 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 SPAG4Q9NPE6 437 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 CTPS2Q9NRF8 586 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 RPS6KB2Q9UBS0 482 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 CHRNA9Q9UGM1 479 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 ITGB1BP2Q9UKP3 347 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 MCTS1Q9ULC4 181 aaKnown RBP9.92□□□□□ -0.82
CHD3-216ENST00000573936 ZNF175Q9Y473 711 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 CHST2Q9Y4C5 530 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 PKDREJQ9NTG1 2253 aa9.92□□□□□ -0.82
CHD3-216ENST00000573936 SETD2Q9BYW2 2564 aaPredicted RBP9.91□□□□□ -0.82
CHD3-216ENST00000573936 A0A0J9YW62 118 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 AP3D1O14617 1153 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 TNFSF11O14788 317 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 GSTA4O15217 222 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
CHD3-216ENST00000573936 EFNA2O43921 213 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 GCM2O75603 506 aaPredicted RBP9.91□□□□□ -0.82
CHD3-216ENST00000573936 RCBTB2O95199 551 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 CLDN14O95500 239 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 LGI1O95970 557 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 FCGR2AP12318 317 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 CALB2P22676 271 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 CXCR1P25024 350 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 CTSSP25774 331 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 SLC7A1P30825 629 aa9.91□□□□□ -0.82
CHD3-216ENST00000573936 KDELR2P33947 212 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms