RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 FAM174BQ3ZCQ3 159 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 NCMAPQ5T1S8 102 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 OGFOD2Q6N063 350 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 TMPPEQ6ZT21 453 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 EIF3MQ7L2H7 374 aaKnown RBP16.04■□□□□ 0.16
CHD3-214ENST00000572579 C16orf62Q7Z3J2 963 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 ADGRG3Q86Y34 549 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 SLC43A2Q8N370 569 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 ZNF611Q8N823 705 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 ANKFN1Q8N957 763 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 ST8SIA1Q92185 356 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 ARL5BQ96KC2 179 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 CCDC115Q96NT0 180 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 KCNK9Q9NPC2 374 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 CTPS2Q9NRF8 586 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 CADP27708 2225 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 ABCA2Q9BZC7 2435 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 UQCRHLA0A096LP55 91 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 SMAD7O15105 426 aaKnown RBP16.03■□□□□ 0.16
CHD3-214ENST00000572579 HEXAP06865 529 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 CHRM4P08173 479 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 SOD3P08294 240 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 SLC7A1P30825 629 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 ITGADQ13349 1161 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 COX20Q5RI15 118 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 ANXA8L1Q5VT79 327 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 RNF130Q86XS8 419 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 CNOT9Q92600 299 aaKnown RBP16.03■□□□□ 0.16
CHD3-214ENST00000572579 SLC35A5Q9BS91 424 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 CENPHQ9H3R5 247 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 WDR55Q9H6Y2 383 aaPredicted RBP16.03■□□□□ 0.16
CHD3-214ENST00000572579 SLC6A13Q9NSD5 602 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 EXD2Q9NVH0 621 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 AIG1Q9NVV5 245 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 BTNL2Q9UIR0 455 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 PCDHGB4Q9UN71 923 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 WDR45Q9Y484 360 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 GPR45Q9Y5Y3 372 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 JMJD1CQ15652 2540 aa16.03■□□□□ 0.16
CHD3-214ENST00000572579 ZNF716A6NP11 495 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 ZNF724A8MTY0 619 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 E9PBE3 544 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 OVOL3O00110 214 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 AP3D1O14617 1153 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 LYZL6O75951 148 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 CNOT4O95628 575 aaKnown RBP16.02■□□□□ 0.16
CHD3-214ENST00000572579 FESP07332 822 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 DANCRP0C864 163 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 IGHV1-2P23083 117 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 RYKP34925 604 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 KCNJ10P78508 379 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 P2RY6Q15077 328 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 SYPL1Q16563 259 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 SYT14P1Q58G82 188 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 ADAM5Q6NVV9 412 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 C3orf33Q6P1S2 294 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 Q6ZT83 130 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 LRRC34Q8IZ02 419 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 PIWIL2Q8TC59 973 aaKnown RBP16.02■□□□□ 0.16
CHD3-214ENST00000572579 HSD17B8Q92506 261 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 KISS1RQ969F8 398 aaPredicted RBP16.02■□□□□ 0.16
CHD3-214ENST00000572579 OR11A1Q9GZK7 315 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 SLC38A1Q9H2H9 487 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 POLE3Q9NRF9 147 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 KLHL9Q9P2J3 617 aa16.02■□□□□ 0.16
CHD3-214ENST00000572579 MARCOQ9UEW3 520 aaPredicted RBP16.02■□□□□ 0.16
CHD3-214ENST00000572579 CCDC154A6NI56 674 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 ZNF500O60304 480 aaPredicted RBP16.01■□□□□ 0.15
CHD3-214ENST00000572579 SNNO75324 88 aaPredicted RBP16.01■□□□□ 0.15
CHD3-214ENST00000572579 GSNP06396 782 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 PGCP20142 388 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 IL32P24001 234 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 EPHA3P29320 983 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 S100A3P33764 101 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 FOXG1P55316 489 aaPredicted RBP16.01■□□□□ 0.15
CHD3-214ENST00000572579 ABLIM2Q6H8Q1 611 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 BHLHA15Q7RTS1 189 aaPredicted RBP16.01■□□□□ 0.15
CHD3-214ENST00000572579 MAVSQ7Z434 540 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 MTDHQ86UE4 582 aaKnown RBP16.01■□□□□ 0.15
CHD3-214ENST00000572579 CCDC103Q8IW40 242 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 NPAP1Q9NZP6 1156 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 LAMP3Q9UQV4 416 aa16.01■□□□□ 0.15
CHD3-214ENST00000572579 IGKV3D-15A0A087WSY6 115 aa16■□□□□ 0.15
CHD3-214ENST00000572579 GOLGA8QA0A0J9YX86 632 aa16■□□□□ 0.15
CHD3-214ENST00000572579 GOLGA8OA6NCC3 632 aa16■□□□□ 0.15
CHD3-214ENST00000572579 AGAP5A6NIR3 686 aa16■□□□□ 0.15
CHD3-214ENST00000572579 GOLGA8NF8WBI6 632 aa16■□□□□ 0.15
CHD3-214ENST00000572579 SULT2B1O00204 365 aa16■□□□□ 0.15
CHD3-214ENST00000572579 CLOCKO15516 846 aa16■□□□□ 0.15
CHD3-214ENST00000572579 SNUPNO95149 360 aaKnown RBP16■□□□□ 0.15
CHD3-214ENST00000572579 APOBEC1P41238 236 aaKnown RBP16■□□□□ 0.15
CHD3-214ENST00000572579 MVDP53602 400 aa16■□□□□ 0.15
CHD3-214ENST00000572579 CLNS1AP54105 237 aaKnown RBP16■□□□□ 0.15
CHD3-214ENST00000572579 BSPH1Q075Z2 132 aa16■□□□□ 0.15
CHD3-214ENST00000572579 PGGHGQ32M88 737 aa16■□□□□ 0.15
CHD3-214ENST00000572579 ANKRD42Q8N9B4 389 aa16■□□□□ 0.15
CHD3-214ENST00000572579 TMEM234Q8WY98 164 aa16■□□□□ 0.15
CHD3-214ENST00000572579 PAIP2Q9BPZ3 127 aaKnown RBP16■□□□□ 0.15
CHD3-214ENST00000572579 BDH2Q9BUT1 245 aa16■□□□□ 0.15
CHD3-214ENST00000572579 FANCFQ9NPI8 374 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms