RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 BEND6Q5SZJ8 279 aaPredicted RBP12.22□□□□□ -0.45
RAB40B-204ENST00000571554 ATG16L1Q676U5 607 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 Q71RC1 249 aaPredicted RBP12.22□□□□□ -0.45
RAB40B-204ENST00000571554 ATG4DQ86TL0 474 aaPredicted RBP12.22□□□□□ -0.45
RAB40B-204ENST00000571554 GABRG1Q8N1C3 465 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 TMEM234Q8WY98 164 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 TLCD1Q96CP7 247 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 PERPQ96FX8 193 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 OR52B2Q96RD2 323 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 PSD2Q9BQI7 771 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 OR11A1Q9GZK7 315 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 SAP130Q9H0E3 1048 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 SLC38A1Q9H2H9 487 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 DLL4Q9NR61 685 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 SERINC1Q9NRX5 453 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 ACER3Q9NUN7 267 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 SLC35A3Q9Y2D2 325 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 ROS1P08922 2347 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF814B7Z6K7 855 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 SULT2B1O00204 365 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 RFXANKO14593 260 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 DNAJA2O60884 412 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 ERLIN1O75477 346 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 PPP3CBP16298 524 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 PSMB1P20618 241 aaKnown RBP12.21□□□□□ -0.45
RAB40B-204ENST00000571554 IL32P24001 234 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 IDH2P48735 452 aaKnown RBP12.21□□□□□ -0.45
RAB40B-204ENST00000571554 SYT14P1Q58G82 188 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 Q5PR19 223 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF704Q6ZNC4 412 aaPredicted RBP12.21□□□□□ -0.45
RAB40B-204ENST00000571554 P3H2Q8IVL5 708 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 ARFGAP2Q8N6H7 521 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 TRIML2Q8N7C3 387 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 OR9I1Q8NGQ6 314 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 RAB3IL1Q8TBN0 382 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 ARL8AQ96BM9 186 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 ARL5BQ96KC2 179 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 CCDC106Q9BWC9 280 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 FANCFQ9NPI8 374 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 POLE3Q9NRF9 147 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.21□□□□□ -0.45
RAB40B-204ENST00000571554 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 GPR52Q9Y2T5 361 aa12.21□□□□□ -0.45
RAB40B-204ENST00000571554 CYTIPO60759 359 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 SLC22A3O75751 556 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 LYZL6O75951 148 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 IGHV3-9P01782 118 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 NR2F1P10589 423 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 ETFAP13804 333 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 FPR1P21462 350 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 CAPRIN1Q14444 709 aaKnown RBP12.2□□□□□ -0.46
RAB40B-204ENST00000571554 PDCD4Q53EL6 469 aaKnown RBP12.2□□□□□ -0.46
RAB40B-204ENST00000571554 SFRP5Q5T4F7 317 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 TMPPEQ6ZT21 453 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 SLC43A2Q8N370 569 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 WDR60Q8WVS4 1066 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 PIGTQ969N2 578 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 VPS33AQ96AX1 596 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 AURKBQ96GD4 344 aaPredicted RBP12.2□□□□□ -0.46
RAB40B-204ENST00000571554 MAELQ96JY0 434 aaKnown RBP12.2□□□□□ -0.46
RAB40B-204ENST00000571554 TRNT1Q96Q11 434 aaKnown RBP12.2□□□□□ -0.46
RAB40B-204ENST00000571554 BCO1Q9HAY6 547 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 CHRNA9Q9UGM1 479 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 ARID1AO14497 2285 aa12.2□□□□□ -0.46
RAB40B-204ENST00000571554 AGAP5A6NIR3 686 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 SLCO1B7G3V0H7 640 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 CLOCKO15516 846 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 RAMP1O60894 148 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 ANP32DO95626 131 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 GUSBP08236 651 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 IDO1P14902 403 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 APOBEC1P41238 236 aaKnown RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 OR3A2P47893 321 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 OR2B6P58173 313 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 TAB1Q15750 504 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 MAPK11Q15759 364 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 STK11Q15831 433 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 RPS26P11Q5JNZ5 115 aaPredicted RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 MRPL2Q5T653 305 aaKnown RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 LRRC74BQ6ZQY2 392 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 BHLHA15Q7RTS1 189 aaPredicted RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 GRINAQ7Z429 371 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 VRK2Q86Y07 508 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 ADGRG3Q86Y34 549 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 PIWIL2Q8TC59 973 aaKnown RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 SLC25A43Q8WUT9 341 aaPredicted RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 ZNF75CPQ92670 426 aaPredicted RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 KISS1RQ969F8 398 aaPredicted RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 TACO1Q9BSH4 297 aaKnown RBP12.19□□□□□ -0.46
RAB40B-204ENST00000571554 RLIMQ9NVW2 624 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 LIPT1Q9Y234 373 aa12.19□□□□□ -0.46
RAB40B-204ENST00000571554 TMED7-TICAM2A0A0A6YYA0 188 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 TMEM72A0PK05 275 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 UBDO15205 165 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 KRT75O95678 551 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 IL6P05231 212 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 BCHEP06276 602 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 GKN3PP0CG01 181 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 IL7RP16871 459 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms