RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TBL1XO60907 577 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 RNASEH1O60930 286 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 PRKRAO75569 313 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CDC123O75794 336 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CIB2O75838 187 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 KIAA0754O94854 1291 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CPNE6O95741 557 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 SFTPBP07988 381 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 RNF224P0DH78 156 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 RRASP10301 218 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 POLR2EP19388 210 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 TNNI3P19429 210 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CASP1P29466 404 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCR1P32246 355 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CHRNA7P36544 502 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 SLC1A3P43003 542 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 PTGFRP43088 359 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 UQCRFS1P47985 274 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ARRB1P49407 418 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 NDST1P52848 882 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 UCNP55089 124 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 KCNK10P57789 538 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ERVPABLB-1P60509 514 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 MYBPC1Q00872 1141 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 DMTNQ08495 405 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 C1orf61Q13536 156 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 TPD52L1Q16890 204 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ODF4Q2M2E3 257 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 DEFB133Q30KQ1 61 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ARMCX4Q5H9R4 360 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 RABGAP1LQ5R372 815 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 IL23RQ5VWK5 629 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 LIPKQ5VXJ0 399 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF776Q68DI1 518 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 FAM173BQ6P4H8 233 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 GUSBP11Q6P575 273 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 TRIM65Q6PJ69 517 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ANGPTL8Q6UXH0 198 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 Q6ZSR9 355 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CLEC20AQ6ZU45 233 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 EFL1Q7Z2Z2 1120 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CPEB2Q7Z5Q1 589 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 C5orf24Q7Z6I8 188 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 YRDCQ86U90 279 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 NELFCDQ8IXH7 590 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CDK20Q8IZL9 346 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 GCNT2Q8N0V5 402 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 LRTM2Q8N967 370 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 BBOF1Q8ND07 529 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 PPFIBP2Q8ND30 876 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 MAPK15Q8TD08 544 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ANKRD49Q8WVL7 239 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 HTR3CQ8WXA8 447 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 PHYHIPQ92561 330 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 OSTF1Q92882 214 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 RAB39BQ96DA2 213 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 DNAJC19Q96DA6 116 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 TMA16Q96EY4 203 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 SMARCD1Q96GM5 515 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 POM121L2Q96KW2 1035 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCNL2Q96S94 520 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ALG12Q9BV10 488 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 GPR61Q9BZJ8 451 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 WDR76Q9H967 626 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 SGK2Q9HBY8 427 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 DMAP1Q9NPF5 467 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 RPRD1BQ9NQG5 326 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 GLRX2Q9NS18 164 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 FAM207AQ9NSI2 230 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 STARD5Q9NSY2 213 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 PLCXD1Q9NUJ7 323 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 KLHL8Q9P2G9 620 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZDHHC2Q9UIJ5 367 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 GGA2Q9UJY4 613 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 MRPS2Q9Y399 296 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 RNF115Q9Y4L5 304 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 U3KQA8 63 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 FLNCQ14315 2725 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 SDK2Q58EX2 2172 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 BOD1L1Q8NFC6 3051 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 KNL1Q8NG31 2342 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 COL6A6A6NMZ7 2263 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 TEP1Q99973 2627 aaKnown RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 LINC00854A0A1B0GVQ3 168 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 FAM92AA1XBS5 289 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 MFSD2BA6NFX1 497 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 A8MUI8 341 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 K7EM74 188 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 LGALS8O00214 317 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SDHDO14521 159 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SNNO75324 88 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 TM7SF2O76062 418 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 MFN2O95140 757 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 CYP11B1P15538 503 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SFTPDP35247 375 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 DRD3P35462 400 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ETV5P41161 510 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 CSKP41240 450 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 RGS4P49798 205 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms