RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 MS4A4EQ96PG1 132 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 C12orf57Q99622 126 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 KATNB1Q9BVA0 655 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 PRTFDC1Q9NRG1 225 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 UBE2J1Q9Y385 318 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 LATO43561 262 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 HOXB5P09067 269 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ANXA7P20073 488 aaKnown RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 TAS2R31P59538 309 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 PPA1Q15181 289 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 CLPPQ16740 277 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 SYT14P1Q58G82 188 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 RPL22L1Q6P5R6 122 aaKnown RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 PAPD4Q6PIY7 484 aaKnown RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC16A12Q6ZSM3 486 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ERN2Q76MJ5 926 aaKnown RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 CCDC190Q86UF4 302 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 SUMF2Q8NBJ7 301 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC22A8Q8TCC7 542 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 CDS1Q92903 461 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 PRR14Q9BWN1 585 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 GABARAPL1Q9H0R8 117 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ACKR4Q9NPB9 350 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ACER3Q9NUN7 267 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ASB6Q9NWX5 421 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 B3GALT1Q9Y5Z6 326 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 B4DGG1 531 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 RAD51DO75771 328 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 IFNA10P01566 189 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 IFNA4P05014 189 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ATP1B1P05026 303 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ADRB1P08588 477 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ETV6P41212 452 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 NKG7Q16617 165 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZBTB37Q5TC79 503 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 OLIG3Q7RTU3 272 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 L3MBTL4Q8NA19 623 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 OR13C2Q8NGS9 318 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 FAM83CQ9BQN1 747 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 CXorf36Q9H7Y0 433 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 FZD3Q9NPG1 666 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 TUBG2Q9NRH3 451 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 GPATCH2Q9NW75 528 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 RPH3AQ9Y2J0 694 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ATG4BQ9Y4P1 393 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 SDK1Q7Z5N4 2213 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 ARID1AO14497 2285 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 STMND1H3BQB6 276 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SCO2O43819 266 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 TPPPO94811 219 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 LATS1O95835 1130 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 IFNA1P01562 189 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 C6P13671 934 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 PTBP1P26599 531 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SOX9P48436 509 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 RAB28P51157 221 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 CAPZA1P52907 286 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 CLDN20P56880 219 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 MEF2DQ14814 521 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 HENMT1Q5T8I9 393 aaKnown RBP11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 TMEM200AQ86VY9 491 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLAMF9Q96A28 289 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 OR14A2Q96R54 314 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 HRASLS2Q9NWW9 162 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 NDUFB11Q9NX14 153 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC23A1Q9UHI7 598 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 ADAMTS5Q9UNA0 930 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC35A3Q9Y2D2 325 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 AKAP11Q9UKA4 1901 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SMCO3A2RU48 225 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 WDPCPO95876 746 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SYN1P17600 705 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 MMP11P24347 488 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 CDK2P24941 298 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 KCNJ10P78508 379 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 PDZK1IP1Q13113 114 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 P4HA3Q7Z4N8 544 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 RBM45Q8IUH3 476 aaKnown RBP11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 LIX1LQ8IVB5 337 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 CMIPQ8IY22 773 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 TCTE3Q8IZS6 198 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SFXN5Q8TD22 340 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 ST6GALNAC5Q9BVH7 336 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 HCAR1Q9BXC0 346 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 GABARAPL3Q9BY60 117 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 NARFLQ9H6Q4 476 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 KLRF1Q9NZS2 232 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 KLHL42Q9P2K6 505 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF281Q9Y2X9 895 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 PUS1Q9Y606 427 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 GPRIN2O60269 458 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 DNAJB6O75190 326 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 PIPP12273 146 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 NME2P22392 152 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 EVX1P49640 407 aa11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SEC61A1P61619 476 aaKnown RBP11.59□□□□□ -0.55
CSPG4P13-202ENST00000567704 SIRPAP78324 504 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms