RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CPOXP36551 454 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 ACAA2P42765 397 aaKnown RBP10.97□□□□□ -0.65
SF3B3-208ENST00000567250 STARP49675 285 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 SMSP52788 366 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 SGCBQ16585 318 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 NRF1Q16656 503 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 DUSP7Q16829 419 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 CYBRD1Q53TN4 286 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 NSUN5P2Q63ZY6 315 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 POMZP3Q6PJE2 187 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 LSMEM1Q8N8F7 131 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 OR52E4Q8NGH9 312 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 DNAJA4Q8WW22 397 aaPredicted RBP10.97□□□□□ -0.65
SF3B3-208ENST00000567250 DDIT4LQ96D03 193 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 TRIB1Q96RU8 372 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 CDRT15Q96T59 188 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 ARHGDIGQ99819 225 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 KLHDC3Q9BQ90 382 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 MUC13Q9H3R2 512 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 TMEM185BQ9H7F4 350 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 C12orf10Q9HB07 376 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 COQ3Q9NZJ6 369 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 MCTS1Q9ULC4 181 aaKnown RBP10.97□□□□□ -0.65
SF3B3-208ENST00000567250 SAMD4AQ9UPU9 718 aaKnown RBP10.97□□□□□ -0.65
SF3B3-208ENST00000567250 NCOA6Q14686 2063 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-208ENST00000567250 CD8B2A6NJW9 211 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 CLCA1A8K7I4 914 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 ZNF208O43345 1280 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 FRS3O43559 492 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 ADAM11O75078 769 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 ATP5HO75947 161 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 STAMBPO95630 424 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 EPPINO95925 133 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 T-ENOLP0DO92 83 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 CXCR1P25024 350 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 TACR3P29371 465 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 SFTPDP35247 375 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 EIF1AXP47813 144 aaKnown RBP10.96□□□□□ -0.65
SF3B3-208ENST00000567250 CLK1P49759 484 aaKnown RBP10.96□□□□□ -0.65
SF3B3-208ENST00000567250 GLIPR1L2Q4G1C9 344 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 SYT14P1Q58G82 188 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 SWT1Q5T5J6 900 aaKnown RBP10.96□□□□□ -0.65
SF3B3-208ENST00000567250 GLYATQ6IB77 296 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 C5orf46Q6UWT4 87 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 C3P1Q6ZMU1 363 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 GGNQ86UU5 652 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 RNF148Q8N7C7 305 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 GPR32P1Q8NGA4 272 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 OR2V1Q8NHB1 315 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 CPNE4Q96A23 557 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-208ENST00000567250 CCDC120Q96HB5 630 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 ZFP3Q96NJ6 502 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 UCN2Q96RP3 112 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 DMRTA2Q96SC8 542 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 NPAS1Q99742 590 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 TM9SF2Q99805 663 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 TUBA1CQ9BQE3 449 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 POLR2J2Q9GZM3 115 aaKnown RBP10.96□□□□□ -0.65
SF3B3-208ENST00000567250 POLR2J3Q9H1A7 115 aaKnown RBP10.96□□□□□ -0.65
SF3B3-208ENST00000567250 CALHM2Q9HA72 323 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 TMEM27Q9HBJ8 222 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 CTPS2Q9NRF8 586 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 EGFL7Q9UHF1 273 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 ERRFI1Q9UJM3 462 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-208ENST00000567250 OSGIN1Q9UJX0 560 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 SH3GLB1Q9Y371 365 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 ZNF175Q9Y473 711 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 FAM215AQ9Y5M1 114 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 SNX13Q9Y5W8 968 aa10.96□□□□□ -0.65
SF3B3-208ENST00000567250 MED12Q93074 2177 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 TMED7-TICAM2A0A0A6YYA0 188 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 MBD3L4A6NDZ8 208 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 MBD3L3A6NE82 208 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 MBD3L5A6NJ08 208 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 SLC22A20A6NK97 555 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ELOA3DA6NLF2 546 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 M0R3H8 397 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ADAMDEC1O15204 470 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 GYG2O15488 501 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 SYNGR4O95473 234 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ZNF682O95780 498 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 IL2RAP01589 272 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 TFPIP10646 304 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 PNMTP11086 282 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 PRG2P13727 222 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 TCN1P20061 433 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 IFNA8P32881 189 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 TIMP3P35625 211 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ZNF136P52737 540 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 CRYBA2P53672 197 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 CLDN15P56746 228 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 CLDN20P56880 219 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 SELENOWP63302 87 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 CSNK2A1P68400 391 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 FXNQ16595 210 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ELOA3BQ3SY89 546 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ALG10BQ5I7T1 473 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 RIPPLY2Q5TAB7 128 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 HBMQ6B0K9 141 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 OR2A2Q6IF42 318 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms