RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 TSG101Q99816 390 aa2.56□□□□□ -2
PALB2-203ENST00000565038 RASL11BQ9BPW5 248 aa2.56□□□□□ -2
PALB2-203ENST00000565038 NEUROG3Q9Y4Z2 214 aa2.56□□□□□ -2
PALB2-203ENST00000565038 NACAE9PAV3 2078 aa2.56□□□□□ -2
PALB2-203ENST00000565038 CTAGE5O15320 804 aa2.55□□□□□ -2
PALB2-203ENST00000565038 MSH4O15457 936 aa2.55□□□□□ -2
PALB2-203ENST00000565038 PRKYO43930 277 aa2.55□□□□□ -2
PALB2-203ENST00000565038 OR10H3O60404 316 aa2.55□□□□□ -2
PALB2-203ENST00000565038 UGT2B17O75795 530 aa2.55□□□□□ -2
PALB2-203ENST00000565038 PCCAP05165 728 aaPredicted RBP2.55□□□□□ -2
PALB2-203ENST00000565038 ATP6V1B2P21281 511 aa2.55□□□□□ -2
PALB2-203ENST00000565038 PSMA2P25787 234 aa2.55□□□□□ -2
PALB2-203ENST00000565038 LEPP41159 167 aa2.55□□□□□ -2
PALB2-203ENST00000565038 PRKXP51817 358 aa2.55□□□□□ -2
PALB2-203ENST00000565038 HSPA2P54652 639 aa2.55□□□□□ -2
PALB2-203ENST00000565038 TGFBR3Q03167 851 aa2.55□□□□□ -2
PALB2-203ENST00000565038 FRMPD4Q14CM0 1322 aa2.55□□□□□ -2
PALB2-203ENST00000565038 GPRASP1Q5JY77 1395 aa2.55□□□□□ -2
PALB2-203ENST00000565038 RABGAP1LQ5R372 815 aa2.55□□□□□ -2
PALB2-203ENST00000565038 ACP7Q6ZNF0 438 aa2.55□□□□□ -2
PALB2-203ENST00000565038 ZNF429Q86V71 674 aa2.55□□□□□ -2
PALB2-203ENST00000565038 TPRA1Q86W33 373 aa2.55□□□□□ -2
PALB2-203ENST00000565038 PNKDQ8N490 385 aa2.55□□□□□ -2
PALB2-203ENST00000565038 MDS2Q8NDY4 140 aa2.55□□□□□ -2
PALB2-203ENST00000565038 PIGCQ92535 297 aa2.55□□□□□ -2
PALB2-203ENST00000565038 RAPGEF5Q92565 580 aa2.55□□□□□ -2
PALB2-203ENST00000565038 C12orf66Q96MD2 445 aa2.55□□□□□ -2
PALB2-203ENST00000565038 NXF5Q9H1B4 397 aaKnown RBP2.55□□□□□ -2
PALB2-203ENST00000565038 VCPKMTQ9H867 229 aa2.55□□□□□ -2
PALB2-203ENST00000565038 WDR76Q9H967 626 aa2.55□□□□□ -2
PALB2-203ENST00000565038 CYTL1Q9NRR1 136 aa2.55□□□□□ -2
PALB2-203ENST00000565038 KIF25Q9UIL4 384 aa2.55□□□□□ -2
PALB2-203ENST00000565038 ODF2LQ9ULJ1 636 aa2.55□□□□□ -2
PALB2-203ENST00000565038 ASF1AQ9Y294 204 aa2.55□□□□□ -2
PALB2-203ENST00000565038 GSTK1Q9Y2Q3 226 aa2.55□□□□□ -2
PALB2-203ENST00000565038 ARID1AO14497 2285 aa2.54□□□□□ -2
PALB2-203ENST00000565038 CCDC180Q9P1Z9 1646 aa2.54□□□□□ -2
PALB2-203ENST00000565038 PLEKHH1Q9ULM0 1364 aa2.54□□□□□ -2
PALB2-203ENST00000565038 CLSPNQ9HAW4 1339 aa2.54□□□□□ -2
PALB2-203ENST00000565038 E7ESA3 106 aa2.54□□□□□ -2
PALB2-203ENST00000565038 G3V4G9 280 aa2.54□□□□□ -2
PALB2-203ENST00000565038 TMX2-CTNND1H3BSU7 103 aa2.54□□□□□ -2
PALB2-203ENST00000565038 FAM189A1O60320 539 aa2.54□□□□□ -2
PALB2-203ENST00000565038 TNFSF13O75888 250 aa2.54□□□□□ -2
PALB2-203ENST00000565038 LGI1O95970 557 aa2.54□□□□□ -2
PALB2-203ENST00000565038 PGCP20142 388 aa2.54□□□□□ -2
PALB2-203ENST00000565038 TBXA2RP21731 343 aa2.54□□□□□ -2
PALB2-203ENST00000565038 HPCAL1P37235 193 aa2.54□□□□□ -2
PALB2-203ENST00000565038 CCR6P51684 374 aa2.54□□□□□ -2
PALB2-203ENST00000565038 ARL6IP1Q15041 203 aa2.54□□□□□ -2
PALB2-203ENST00000565038 RFLNAQ6ZTI6 216 aa2.54□□□□□ -2
PALB2-203ENST00000565038 TCTEX1D2Q8WW35 142 aa2.54□□□□□ -2
PALB2-203ENST00000565038 RNF185Q96GF1 192 aa2.54□□□□□ -2
PALB2-203ENST00000565038 PLA2G2FQ9BZM2 168 aa2.54□□□□□ -2
PALB2-203ENST00000565038 SLC25A22Q9H936 323 aa2.54□□□□□ -2
PALB2-203ENST00000565038 ERVW-1Q9UQF0 538 aa2.54□□□□□ -2
PALB2-203ENST00000565038 TP53TG5Q9Y2B4 290 aa2.54□□□□□ -2
PALB2-203ENST00000565038 GTF3C1Q12789 2109 aa2.54□□□□□ -2
PALB2-203ENST00000565038 ATP10DQ9P241 1426 aa2.53□□□□□ -2
PALB2-203ENST00000565038 IGKV2D-24A0A075B6R9 120 aa2.53□□□□□ -2
PALB2-203ENST00000565038 A0A087WZY1 265 aa2.53□□□□□ -2
PALB2-203ENST00000565038 P04436 131 aa2.53□□□□□ -2
PALB2-203ENST00000565038 GIPP09681 153 aaPredicted RBP2.53□□□□□ -2
PALB2-203ENST00000565038 POLR2EP19388 210 aaKnown RBP2.53□□□□□ -2
PALB2-203ENST00000565038 CSNK1DP48730 415 aa2.53□□□□□ -2
PALB2-203ENST00000565038 KLK7P49862 253 aa2.53□□□□□ -2
PALB2-203ENST00000565038 PLA2G16P53816 162 aa2.53□□□□□ -2
PALB2-203ENST00000565038 SELENOTP62341 195 aa2.53□□□□□ -2
PALB2-203ENST00000565038 MXD4Q14582 209 aaPredicted RBP2.53□□□□□ -2
PALB2-203ENST00000565038 PTGES3Q15185 160 aaKnown RBP2.53□□□□□ -2
PALB2-203ENST00000565038 TRIM16LQ309B1 348 aa2.53□□□□□ -2
PALB2-203ENST00000565038 NSUN5P1Q3KNT7 163 aa2.53□□□□□ -2
PALB2-203ENST00000565038 CASC10Q5T4H9 136 aa2.53□□□□□ -2
PALB2-203ENST00000565038 LRRC43Q8N309 656 aa2.53□□□□□ -2
PALB2-203ENST00000565038 ATP6V0D2Q8N8Y2 350 aa2.53□□□□□ -2
PALB2-203ENST00000565038 NKAPP1Q8N9T2 125 aa2.53□□□□□ -2
PALB2-203ENST00000565038 KCNA7Q96RP8 456 aa2.53□□□□□ -2
PALB2-203ENST00000565038 RHBGQ9H310 441 aa2.53□□□□□ -2
PALB2-203ENST00000565038 VCXQ9H320 206 aa2.53□□□□□ -2
PALB2-203ENST00000565038 RWDD1Q9H446 243 aaPredicted RBP2.53□□□□□ -2
PALB2-203ENST00000565038 MEAF6Q9HAF1 191 aa2.53□□□□□ -2
PALB2-203ENST00000565038 PLGRKTQ9HBL7 147 aa2.53□□□□□ -2
PALB2-203ENST00000565038 AIPL1Q9NZN9 384 aa2.53□□□□□ -2
PALB2-203ENST00000565038 GNG12Q9UBI6 72 aa2.53□□□□□ -2
PALB2-203ENST00000565038 PSG11Q9UQ72 335 aa2.53□□□□□ -2
PALB2-203ENST00000565038 MFHAS1Q9Y4C4 1052 aa2.53□□□□□ -2
PALB2-203ENST00000565038 MAD1L1Q9Y6D9 718 aa2.53□□□□□ -2
PALB2-203ENST00000565038 RB1CC1Q8TDY2 1594 aa2.53□□□□□ -2.01
PALB2-203ENST00000565038 IGHV3OR16-13A0A075B7E8 117 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 IGKV1D-8A0A087WSZ0 117 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 GSAPA4D1B5 854 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 NKX2-6A6NCS4 301 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 A6NIZ1 184 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 RS1O15537 224 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 HCRTR1O43613 425 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 OR1F1O43749 312 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 ICOSLGO75144 302 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 NEBLO76041 1014 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 KIAA0754O94854 1291 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 MOSP00540 346 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms