RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PUSL1Q8N0Z8 303 aaKnown RBP15.09■□□□□ 0.01
LINC00554-201ENST00000564841 OR4D10Q8NGI6 311 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 ZNF671Q8TAW3 534 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 RGMAQ96B86 450 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 MNTQ99583 582 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 ACTR6Q9GZN1 396 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 SEMA4GQ9NTN9 838 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.09■□□□□ 0.01
LINC00554-201ENST00000564841 HIST1H2ABP04908 130 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 CLUP10909 449 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 HOXB1P14653 301 aaPredicted RBP15.09■□□□□ 0.01
LINC00554-201ENST00000564841 PPP3CBP16298 524 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 DHODHQ02127 395 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 BEX5Q5H9J7 111 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 METTL11BQ5VVY1 283 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 ZDHHC20Q5W0Z9 365 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 CD300LDQ6UXZ3 194 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 GLDNQ6ZMI3 551 aaPredicted RBP15.09■□□□□ 0.01
LINC00554-201ENST00000564841 HIST3H2AQ7L7L0 130 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 LDLRAD3Q86YD5 345 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 RFLNBQ8N5W9 214 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 HIST1H2ACQ93077 130 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 NEURL3Q96EH8 262 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 SAMD8Q96LT4 415 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 FKRPQ9H9S5 495 aa15.09■□□□□ 0.01
LINC00554-201ENST00000564841 KIF26AQ9ULI4 1882 aaPredicted RBP15.08■□□□□ 0.01
LINC00554-201ENST00000564841 SDK1Q7Z5N4 2213 aa15.08■□□□□ 0.01
LINC00554-201ENST00000564841 DAPL1A0PJW8 107 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 IRGMA1A4Y4 181 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 EIF3GO75821 320 aaKnown RBP eCLIP15.08■□□□□ 0
LINC00554-201ENST00000564841 SPP1P10451 314 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 RNF144AP50876 292 aaPredicted RBP15.08■□□□□ 0
LINC00554-201ENST00000564841 TAS2R41P59536 307 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 SMAD2Q15796 467 aaKnown RBP15.08■□□□□ 0
LINC00554-201ENST00000564841 ACBD7Q8N6N7 88 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 PXT1Q8NFP0 134 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 LMLNQ96KR4 655 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 CRB3Q9BUF7 120 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 DNTTIP1Q9H147 329 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 A4GALTQ9NPC4 353 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 OR6C65A6NJZ3 312 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 TMEM200CA6NKL6 621 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 PRRT4C9JH25 899 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 SCAMP1O15126 338 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 AKR7A3O95154 331 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 GIPP09681 153 aaPredicted RBP15.08■□□□□ 0
LINC00554-201ENST00000564841 C4BPBP20851 252 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 HSD3B2P26439 372 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 RAG2P55895 527 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 SMIM11AP58511 58 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 ST8SIA6P61647 398 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 RPS15P62841 145 aaKnown RBP15.08■□□□□ 0
LINC00554-201ENST00000564841 MAT1AQ00266 395 aaKnown RBP15.08■□□□□ 0
LINC00554-201ENST00000564841 CSRP2Q16527 193 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 FNDC3BQ53EP0 1204 aaKnown RBP15.08■□□□□ 0
LINC00554-201ENST00000564841 HES5Q5TA89 166 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 OR5J2Q8NH18 312 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 THEM6Q8WUY1 208 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 RFKQ969G6 155 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 ZNF607Q96SK3 696 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 PBX4Q9BYU1 374 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 WDR13Q9H1Z4 485 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 OR51V1Q9H2C8 321 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 ANKRD19PQ9H560 264 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 FBXL4Q9UKA2 621 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 ZMIZ1Q9ULJ6 1067 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 MAFFQ9ULX9 164 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 KCNE3Q9Y6H6 103 aa15.08■□□□□ 0
LINC00554-201ENST00000564841 MPTX1A8MV57 137 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 KHDRBS3O75525 346 aaKnown RBP15.07■□□□□ 0
LINC00554-201ENST00000564841 PRKRAO75569 313 aaKnown RBP15.07■□□□□ 0
LINC00554-201ENST00000564841 RB1P06400 928 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 VSIG10L2P0DP72 767 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 ADH5P11766 374 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 TRHRP34981 398 aaPredicted RBP15.07■□□□□ 0
LINC00554-201ENST00000564841 TBPL1P62380 186 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 SORDQ00796 357 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 SLC9B2Q86UD5 537 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 KCT2Q8NC54 265 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 SMIM4Q8WVI0 70 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 GHSRQ92847 366 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 C4orf36Q96KX1 117 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 SLC39A1Q9NY26 324 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 OPN4Q9UHM6 478 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 EXOGQ9Y2C4 368 aaKnown RBP15.07■□□□□ 0
LINC00554-201ENST00000564841 CDC42EP2O14613 210 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 SGCEO43556 437 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 GYPBP06028 91 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 ACAA1P09110 424 aaPredicted RBP15.07■□□□□ 0
LINC00554-201ENST00000564841 ACADLP28330 430 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 PYCR1P32322 319 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 EPHA4P54764 986 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 RAP2BP61225 183 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 ZNF528Q3MIS6 628 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 HAGHLQ6PII5 290 aaPredicted RBP15.07■□□□□ 0
LINC00554-201ENST00000564841 TRAPPC5Q8IUR0 188 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 NRMQ8IXM6 262 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 TMEM185AQ8NFB2 350 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 ZNF480Q8WV37 535 aa15.07■□□□□ 0
LINC00554-201ENST00000564841 KCTD12Q96CX2 325 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms