RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ADAM21Q9UKJ8 722 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 PRDM4Q9UKN5 801 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CAMK2AQ9UQM7 478 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SPTAN1Q13813 2472 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 PTPN13Q12923 2485 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ICE1Q9Y2F5 2266 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 A0A0G2JNJ9 132 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 H3BML4 177 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 GCM2O75603 506 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 NUDT14O95848 222 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 FAM107AO95990 144 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 PABPC4LP0CB38 370 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 PGCP20142 388 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 POU3F2P20265 443 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 IL11P20809 199 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ACAA2P42765 397 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SMSP52788 366 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SESN3P58005 492 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ART3Q13508 389 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SCARB2Q14108 478 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ZSWIM7Q19AV6 140 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 LIN52Q52LA3 116 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RABL3Q5HYI8 236 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RIPPLY2Q5TAB7 128 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 FAM91A1Q658Y4 838 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 POMZP3Q6PJE2 187 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF836Q6ZNA1 936 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 C8orf86Q6ZUL3 223 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ZZZ3Q8IYH5 903 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CLIP4Q8N3C7 705 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 C11orf65Q8NCR3 313 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 NAXEQ8NCW5 288 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 HIPK4Q8NE63 616 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 OR10A6Q8NH74 314 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 NFKBIDQ8NI38 313 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SLC35B4Q969S0 331 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RCN3Q96D15 328 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF583Q96ND8 569 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CCT8L2Q96SF2 557 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SH3GL1Q99961 368 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SPATA9Q9BWV2 254 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ACER3Q9NUN7 267 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 Q9UFV3 132 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RNF6Q9Y252 685 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF443Q9Y2A4 671 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ARL2BPQ9Y2Y0 163 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 IFT52Q9Y366 437 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SPTBN1Q01082 2364 aaKnown RBP5.56□□□□□ -1.52
CNOT1-204ENST00000563130 KIAA1549Q9HCM3 1950 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 CLCA1A8K7I4 914 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 C5orf58C9J3I9 102 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 FAM47E-STBD1D6RA91 191 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 H0Y3Z8 333 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 CYP7B1O75881 506 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 PRDX6P30041 224 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 CHRNB4P30926 498 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 PRKAR1BP31321 381 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 GNALP38405 381 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 SLC6A8P48029 635 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 CCR4P51679 360 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 EEFSECP57772 596 aaKnown RBP5.56□□□□□ -1.52
CNOT1-204ENST00000563130 SRYQ05066 204 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 EPS8Q12929 822 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 LARS2Q15031 903 aaKnown RBP5.56□□□□□ -1.52
CNOT1-204ENST00000563130 VMACQ2NL98 169 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF311Q5JNZ3 666 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 HACD2Q6Y1H2 254 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 ESPNLQ6ZVH7 1005 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 COMTD1Q86VU5 262 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 UBQLNLQ8IYU4 475 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 LILRA2Q8N149 483 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 TMCO5AQ8N6Q1 288 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 TNIP2Q8NFZ5 429 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 LILRB4Q8NHJ6 448 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 TMEM234Q8WY98 164 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 SDCCAG3Q96C92 435 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 C12orf49Q9H741 205 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 GID8Q9NWU2 228 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 STOML1Q9UBI4 398 aa5.56□□□□□ -1.52
CNOT1-204ENST00000563130 KLF2Q9Y5W3 355 aaPredicted RBP5.56□□□□□ -1.52
CNOT1-204ENST00000563130 A0A0J9YW62 118 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CFAP73A6NFT4 308 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 AP3D1O14617 1153 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 SEC14L5O43304 696 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 TPST1O60507 370 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 MFN2O95140 757 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 RCBTB2O95199 551 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CLDN14O95500 239 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 TGM6O95932 706 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 SHC1P29353 583 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 RYKP34925 604 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 PCGF2P35227 344 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF136P52737 540 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CRYBA2P53672 197 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 DMTNQ08495 405 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 SELENBP1Q13228 472 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CYP51A1Q16850 503 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 DHRS4L2Q6PKH6 230 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 PLXDC2Q6UX71 529 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 PLEKHM3Q6ZWE6 761 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms