RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 OR2B11Q5JQS5 317 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 CELF3Q5SZQ8 465 aaKnown RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 SPATA46Q5T0L3 261 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 DCST2Q5T1A1 773 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 GALNT17Q6IS24 598 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PLBD1Q6P4A8 553 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 BTNL3Q6UXE8 466 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ANGPTL8Q6UXH0 198 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 C1orf186Q6ZWK4 172 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 OTUD6AQ7L8S5 288 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 TBC1D21Q8IYX1 336 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 BBS1Q8NFJ9 593 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 NEK11Q8NG66 645 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ANKRD49Q8WVL7 239 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ART4Q93070 314 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 TMEM80Q96HE8 168 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 SMIM14Q96QK8 99 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 RUFY1Q96T51 708 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 SPXQ9BT56 116 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ATG10Q9H0Y0 220 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 CLSTN2Q9H4D0 955 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 SUDS3Q9H7L9 328 aaPredicted RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PTGES2Q9H7Z7 377 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 VPS37BQ9H9H4 285 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNHIT6Q9NWK9 470 aaKnown RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 COX16Q9P0S2 106 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 HPCAL4Q9UM19 191 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PLXNB2O15031 1838 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PHIPQ8WWQ0 1821 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNFX1Q9P2E3 1918 aaKnown RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ARAP2Q8WZ64 1704 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 CLRN2A0PK11 232 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 PINLYPA6NC86 204 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 B4DXG7 233 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 ERVV-1B6SEH8 477 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 E9PMD0 336 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 KRTAP4-16G5E9R7 235 aaPredicted RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 SGK494L7N484 410 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 IMPA2O14732 288 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 TBL1XO60907 577 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF254O75437 659 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 LYPLA1O75608 230 aaPredicted RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 CABYRO75952 493 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 JCHAINP01591 159 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 CCDC192P0DO97 292 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 TOP1P11387 765 aaKnown RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 NR2C1P13056 603 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF32P17041 273 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 EIF2S2P20042 333 aaKnown RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 CCNA2P20248 432 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 IL10P22301 178 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 CCNCP24863 283 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 PRDX2P32119 198 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 EFNA3P52797 238 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 RND3P61587 244 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 GNB2P62879 340 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 OTUD4Q01804 1114 aaKnown RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF45Q02386 682 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 IFT88Q13099 833 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 KCNJ11Q14654 390 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 KARSQ15046 597 aaKnown RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 LRRC23Q53EV4 343 aaPredicted RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 EOGTQ5NDL2 527 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 WSCD1Q658N2 575 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 IRGCQ6NXR0 463 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 UNC5DQ6UXZ4 953 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 FRA10AC1Q70Z53 315 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 COPS6Q7L5N1 327 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 TRPM8Q7Z2W7 1104 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 HSD17B13Q7Z5P4 300 aaPredicted RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 RABEPKQ7Z6M1 372 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 IFNEQ86WN2 208 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 ERI1Q8IV48 349 aaKnown RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF619Q8N2I2 560 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 OR10H4Q8NGA5 316 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 OR52E1Q8NGJ3 308 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 PSMG2Q969U7 264 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 MCHR2Q969V1 340 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 MARC2Q969Z3 335 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 FGGYQ96C11 551 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 SLC25A36Q96CQ1 311 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 ELMO2Q96JJ3 720 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 NSMCE2Q96MF7 247 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 PLEKHF1Q96S99 279 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 NICN1Q9BSH3 213 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 KRT23Q9C075 422 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 RPAP3Q9H6T3 665 aaPredicted RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 SYTL2Q9HCH5 934 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 POLE3Q9NRF9 147 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 AIPL1Q9NZN9 384 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 PCSK1NQ9UHG2 260 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 PLA2G4CQ9UP65 541 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 EIF3LQ9Y262 564 aaKnown RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 CAB39Q9Y376 341 aaPredicted RBP2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 L3MBTL1Q9Y468 752 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 SSC5DA1L4H1 1573 aa2.06□□□□□ -2.08
HDGFL3-202ENST00000562702 FRMPD3Q5JV73 1810 aa2.05□□□□□ -2.08
HDGFL3-202ENST00000562702 ATAD5Q96QE3 1844 aa2.05□□□□□ -2.08
HDGFL3-202ENST00000562702 MYH2Q9UKX2 1941 aa2.05□□□□□ -2.08
HDGFL3-202ENST00000562702 FAM25EA8MYX2 175 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms