RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TAPBPLQ9BX59 468 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 CYTH4Q9UIA0 394 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 CBY1Q9Y3M2 126 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 CEP350Q5VT06 3117 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF670-ZNF695F2Z2N8 137 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SGK494L7N484 410 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 CDC7O00311 574 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 NKX2-8O15522 239 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 LRRTM2O43300 516 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 HBP1O60381 514 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SERPINA1P01009 418 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 STSP08842 583 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 EPXP11678 715 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ACP1P24666 158 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ITGB7P26010 798 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ACTR1BP42025 376 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 MTPNP58546 118 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SPCS3P61009 180 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 RPS7P62081 194 aaKnown RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SPIBQ01892 262 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 MTAPQ13126 283 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SERTAD2Q14140 314 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 PTPRCAPQ14761 206 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 CHRNA6Q15825 494 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SSX1Q16384 188 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 RAB6CQ53S08 254 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 TECRLQ5HYJ1 363 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ATG9BQ674R7 924 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 EFCAB12Q6NXP0 572 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 TAPT1Q6NXT6 567 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 LDB1Q86U70 411 aaPredicted RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 OR2T12Q8NG77 320 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 WDR20Q8TBZ3 569 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 TWIST2Q8WVJ9 160 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 LIPHQ8WWY8 451 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SCMH1Q96GD3 660 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 LRFN5Q96NI6 719 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 KCNA7Q96RP8 456 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 MGLLQ99685 303 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 RAB6CQ9H0N0 254 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SAP30LQ9HAJ7 183 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 GCM1Q9NP62 436 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 RAB18Q9NP72 206 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 GKN1Q9NS71 199 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 GPATCH2LQ9NWQ4 482 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 THUMPD1Q9NXG2 353 aaKnown RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 VNN3Q9NY84 501 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 BTNL2Q9UIR0 455 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 POMT2Q9UKY4 750 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 PTGDR2Q9Y5Y4 395 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ANK1P16157 1881 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 A0A1B0GV90 55 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 OR14I1A6ND48 311 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 MBD3L5A6NJ08 208 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 KPNA3O00505 521 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 NIPSNAP2O75323 286 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 PRKRAO75569 313 aaKnown RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC25A12O75746 678 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SOX30O94993 753 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SCELO95171 688 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 OAZ2O95190 189 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 GLUD1P00367 558 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 IL1RNP18510 177 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 GPD1P21695 349 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 POLR2JP52435 117 aaKnown RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 DIO3P55073 304 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ERVK-25P63136 954 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 DEFA5Q01523 94 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 OPCMLQ14982 345 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 CR1LQ2VPA4 569 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 PRAMEF19Q5SWL8 479 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 FAM109BQ6ICB4 259 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 PRSS55Q6UWB4 352 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SIGLEC15Q6ZMC9 328 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 TPRA1Q86W33 373 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 MFSD6LQ8IWD5 586 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ZBTB8OSQ8IWT0 167 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 APCDD1Q8J025 514 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 LNX2Q8N448 690 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 OR8J3Q8NGG0 315 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 RXFP2Q8WXD0 754 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 POP5Q969H6 163 aaKnown RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC25A46Q96AG3 418 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ART5Q96L15 291 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SFXN2Q96NB2 322 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 OR1F2PQ96R84 312 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SOSTQ9BQB4 213 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 PINK1Q9BXM7 581 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ERVK-6Q9BXR3 956 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ZYG11BQ9C0D3 744 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ACTR6Q9GZN1 396 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 CDCP1Q9H5V8 836 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 PPP1R3EQ9H7J1 279 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 DDX31Q9H8H2 851 aaKnown RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SEBOXQ9HB31 216 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF334Q9HCZ1 680 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 EXOSC4Q9NPD3 245 aaKnown RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 AIG1Q9NVV5 245 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM161AQ9NX61 479 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 GPR83Q9NYM4 423 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms