RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 TNFSF15O95150 251 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 HMGN1P05114 100 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 MST1P26927 711 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 MSX1P28360 303 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 GRK5P34947 590 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 CCR4P51679 360 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 CHAF1BQ13112 559 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 PGGHGQ32M88 737 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 ZNF791Q3KP31 576 aaPredicted RBP13.2□□□□□ -0.3
ZEB1-218ENST00000560196 ELOA3BQ3SY89 546 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 OPN5Q6U736 354 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 KCTD8Q6ZWB6 473 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 SATL1Q86VE3 508 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 SVOPQ8N4V2 548 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 IQCF1Q8N6M8 205 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 ZNF540Q8NDQ6 660 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 ELOA3Q8NG57 546 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 GPR119Q8TDV5 335 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 LIPHQ8WWY8 451 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 SLC38A2Q96QD8 506 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 OR52D1Q9H346 318 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 SDHAF3Q9NRP4 125 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 TVP23BQ9NYZ1 205 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 YARS2Q9Y2Z4 477 aaKnown RBP13.2□□□□□ -0.3
ZEB1-218ENST00000560196 EXPH5Q8NEV8 1989 aa13.2□□□□□ -0.3
ZEB1-218ENST00000560196 EFCAB10A6NFE3 127 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 ANKUB1A6NFN9 424 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 ENO4A6NNW6 628 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 PTGES3LE9PB15 166 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 TP53I11O14683 189 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 RGS10O43665 173 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 PIPP12273 146 aaPredicted RBP13.19□□□□□ -0.3
ZEB1-218ENST00000560196 GP1BBP13224 206 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 SLC15A1P46059 708 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 MLF1P58340 268 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 FXYD6P3P58550 94 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 MVKQ03426 396 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 CRYZQ08257 329 aaKnown RBP13.19□□□□□ -0.3
ZEB1-218ENST00000560196 SNTA1Q13424 505 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 TMEM44Q2T9K0 475 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 ZBED5Q49AG3 693 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 FOXB2Q5VYV0 432 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 TCEANCQ8N8B7 351 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 OR2T33Q8NG76 320 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 OR52L1Q8NGH7 329 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 OR4Q3Q8NH05 313 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 ZNF563Q8TA94 476 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 TMEM163Q8TC26 289 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 FANK1Q8TC84 345 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 SGCDQ92629 289 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 GGHQ92820 318 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 SH3YL1Q96HL8 342 aaPredicted RBP13.19□□□□□ -0.3
ZEB1-218ENST00000560196 SAMD8Q96LT4 415 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 RBM38Q9H0Z9 239 aaKnown RBP13.19□□□□□ -0.3
ZEB1-218ENST00000560196 UBQLN3Q9H347 655 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 ZNF160Q9HCG1 818 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 CPNE5Q9HCH3 593 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 ERVK-18Q9QC07 812 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 BAIAP2Q9UQB8 552 aa13.19□□□□□ -0.3
ZEB1-218ENST00000560196 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.18□□□□□ -0.3
ZEB1-218ENST00000560196 SPAARA0A1B0GVQ0 90 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 STMND1H3BQB6 276 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 ETV2O00321 342 aaPredicted RBP13.18□□□□□ -0.3
ZEB1-218ENST00000560196 KPNA4O00629 521 aaPredicted RBP13.18□□□□□ -0.3
ZEB1-218ENST00000560196 TM4SF5O14894 197 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 PRKYO43930 277 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 ITGA10O75578 1167 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 OR7A10O76100 309 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 SAGP10523 405 aaPredicted RBP13.18□□□□□ -0.3
ZEB1-218ENST00000560196 BMP7P18075 431 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 PCMT1P22061 227 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 ITPKBP27987 946 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 TACR3P29371 465 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 OTX2P32243 289 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 DLSTP36957 453 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 PTGDSP41222 190 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 HTR3AP46098 478 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 RPS18P62269 152 aaKnown RBP13.18□□□□□ -0.3
ZEB1-218ENST00000560196 FHL1Q13642 323 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 TUBA3CQ13748 450 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 SNAPC1Q16533 368 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 COL28A1Q2UY09 1125 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 ANKDD1AQ495B1 522 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 XAF1Q6GPH4 301 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 H3F3CQ6NXT2 135 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 IGF2-ASQ6U949 168 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 GRINAQ7Z429 371 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 GPR141Q7Z602 305 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 RPS19BP1Q86WX3 136 aaKnown RBP13.18□□□□□ -0.3
ZEB1-218ENST00000560196 RAB43Q86YS6 212 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 CYP4Z2PQ8N1L4 340 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 LNX2Q8N448 690 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 DUSP19Q8WTR2 217 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 TMEM234Q8WY98 164 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 ST8SIA1Q92185 356 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 NTNG2Q96CW9 530 aa13.18□□□□□ -0.3
ZEB1-218ENST00000560196 DGCR14Q96DF8 476 aaKnown RBP13.18□□□□□ -0.3
ZEB1-218ENST00000560196 IP6K3Q96PC2 410 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms