RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ST3GAL2Q16842 350 aa15.09■□□□□ 0.01
TPM1-219ENST00000559397 RBM48Q5RL73 367 aaKnown RBP15.09■□□□□ 0.01
TPM1-219ENST00000559397 TMEM81Q6P7N7 255 aa15.09■□□□□ 0.01
TPM1-219ENST00000559397 MDS2Q8NDY4 140 aa15.09■□□□□ 0.01
TPM1-219ENST00000559397 TSPAN14Q8NG11 270 aa15.09■□□□□ 0.01
TPM1-219ENST00000559397 GRHL3Q8TE85 626 aa15.09■□□□□ 0.01
TPM1-219ENST00000559397 ACOT11Q8WXI4 607 aaPredicted RBP15.09■□□□□ 0.01
TPM1-219ENST00000559397 NTNG2Q96CW9 530 aa15.09■□□□□ 0.01
TPM1-219ENST00000559397 CSAG2Q9Y5P2 127 aa15.09■□□□□ 0.01
TPM1-219ENST00000559397 PKD1L2Q7Z442 2459 aa15.09■□□□□ 0.01
TPM1-219ENST00000559397 TRAPPC13A5PLN9 417 aa15.08■□□□□ 0
TPM1-219ENST00000559397 SERINC4A6NH21 518 aa15.08■□□□□ 0
TPM1-219ENST00000559397 TFAP2AP05549 437 aa15.08■□□□□ 0
TPM1-219ENST00000559397 CCL3P10147 92 aa15.08■□□□□ 0
TPM1-219ENST00000559397 OSMP13725 252 aa15.08■□□□□ 0
TPM1-219ENST00000559397 ELK4P28324 431 aa15.08■□□□□ 0
TPM1-219ENST00000559397 EVI2BP34910 448 aa15.08■□□□□ 0
TPM1-219ENST00000559397 ACAA2P42765 397 aaKnown RBP15.08■□□□□ 0
TPM1-219ENST00000559397 TNFSF10P50591 281 aa15.08■□□□□ 0
TPM1-219ENST00000559397 GTF2A1P52655 376 aaPredicted RBP15.08■□□□□ 0
TPM1-219ENST00000559397 NUP107P57740 925 aa15.08■□□□□ 0
TPM1-219ENST00000559397 TUBA4AP68366 448 aa15.08■□□□□ 0
TPM1-219ENST00000559397 LSM11P83369 360 aaKnown RBP eCLIP15.08■□□□□ 03e-11■■■■□ 21.7
TPM1-219ENST00000559397 CDK5R2Q13319 367 aa15.08■□□□□ 0
TPM1-219ENST00000559397 OR1Q1Q15612 314 aa15.08■□□□□ 0
TPM1-219ENST00000559397 FNDC7Q5VTL7 733 aa15.08■□□□□ 0
TPM1-219ENST00000559397 SLC22A10Q63ZE4 541 aa15.08■□□□□ 0
TPM1-219ENST00000559397 NKAIN4Q8IVV8 208 aa15.08■□□□□ 0
TPM1-219ENST00000559397 POGLUT1Q8NBL1 392 aa15.08■□□□□ 0
TPM1-219ENST00000559397 PRSS27Q9BQR3 290 aa15.08■□□□□ 0
TPM1-219ENST00000559397 ZNF559Q9BR84 538 aa15.08■□□□□ 0
TPM1-219ENST00000559397 RTN4RQ9BZR6 473 aa15.08■□□□□ 0
TPM1-219ENST00000559397 PROK2Q9HC23 129 aa15.08■□□□□ 0
TPM1-219ENST00000559397 TUBA8Q9NY65 449 aaPredicted RBP15.08■□□□□ 0
TPM1-219ENST00000559397 ALG1L2C9J202 215 aa15.07■□□□□ 0
TPM1-219ENST00000559397 CLPTM1O96005 669 aa15.07■□□□□ 0
TPM1-219ENST00000559397 TP53P04637 393 aaPredicted RBP15.07■□□□□ 0
TPM1-219ENST00000559397 FAM87AP0C7U9 286 aa15.07■□□□□ 0
TPM1-219ENST00000559397 CASP3P42574 277 aa15.07■□□□□ 0
TPM1-219ENST00000559397 RNF144AP50876 292 aaPredicted RBP15.07■□□□□ 0
TPM1-219ENST00000559397 CRISP1P54107 249 aa15.07■□□□□ 0
TPM1-219ENST00000559397 GAS1P54826 345 aa15.07■□□□□ 0
TPM1-219ENST00000559397 ALDH6A1Q02252 535 aaKnown RBP15.07■□□□□ 0
TPM1-219ENST00000559397 MAD2L1BPQ15013 274 aaPredicted RBP15.07■□□□□ 0
TPM1-219ENST00000559397 BICRALQ6AI39 1079 aa15.07■□□□□ 0
TPM1-219ENST00000559397 ZNF613Q6PF04 617 aa15.07■□□□□ 0
TPM1-219ENST00000559397 Q6ZPB1 254 aaPredicted RBP15.07■□□□□ 0
TPM1-219ENST00000559397 ZNF614Q8N883 585 aa15.07■□□□□ 0
TPM1-219ENST00000559397 FAM71CQ8NEG0 241 aa15.07■□□□□ 0
TPM1-219ENST00000559397 TM9SF4Q92544 642 aa15.07■□□□□ 0
TPM1-219ENST00000559397 ZNF566Q969W8 418 aa15.07■□□□□ 0
TPM1-219ENST00000559397 CNIH4Q9P003 139 aa15.07■□□□□ 0
TPM1-219ENST00000559397 TUBD1Q9UJT1 453 aa15.07■□□□□ 0
TPM1-219ENST00000559397 ITPR1Q14643 2758 aa15.07■□□□□ 0
TPM1-219ENST00000559397 USP24Q9UPU5 2620 aa15.07■□□□□ 0
TPM1-219ENST00000559397 A0A1W2PQD3 144 aa15.06■□□□□ 0
TPM1-219ENST00000559397 ZAR1LA6NP61 321 aa15.06■□□□□ 0
TPM1-219ENST00000559397 SCDO00767 359 aa15.06■□□□□ 0
TPM1-219ENST00000559397 ADAM11O75078 769 aa15.06■□□□□ 0
TPM1-219ENST00000559397 CHMP24386 653 aa15.06■□□□□ 0
TPM1-219ENST00000559397 CRHBPP24387 322 aa15.06■□□□□ 0
TPM1-219ENST00000559397 IFNGR2P38484 337 aa15.06■□□□□ 0
TPM1-219ENST00000559397 IL5RAQ01344 420 aa15.06■□□□□ 0
TPM1-219ENST00000559397 TOP3AQ13472 1001 aaPredicted RBP15.06■□□□□ 0
TPM1-219ENST00000559397 ZNF550Q7Z398 422 aa15.06■□□□□ 0
TPM1-219ENST00000559397 LSMEM1Q8N8F7 131 aa15.06■□□□□ 0
TPM1-219ENST00000559397 PSD4Q8NDX1 1056 aa15.06■□□□□ 0
TPM1-219ENST00000559397 SCMH1Q96GD3 660 aa15.06■□□□□ 0
TPM1-219ENST00000559397 GPA33Q99795 319 aa15.06■□□□□ 0
TPM1-219ENST00000559397 ARHGAP9Q9BRR9 750 aa15.06■□□□□ 0
TPM1-219ENST00000559397 HES7Q9BYE0 225 aa15.06■□□□□ 0
TPM1-219ENST00000559397 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.06■□□□□ 0
TPM1-219ENST00000559397 ADNPQ9H2P0 1102 aa15.06■□□□□ 0
TPM1-219ENST00000559397 TIMMDC1Q9NPL8 285 aa15.06■□□□□ 0
TPM1-219ENST00000559397 SLC7A7Q9UM01 511 aa15.06■□□□□ 0
TPM1-219ENST00000559397 TP53TG5Q9Y2B4 290 aa15.06■□□□□ 0
TPM1-219ENST00000559397 SLC35A3Q9Y2D2 325 aa15.06■□□□□ 0
TPM1-219ENST00000559397 A0A087WXM4 84 aa15.06■□□□□ 0
TPM1-219ENST00000559397 ANKRD33BA6NCL7 494 aa15.06■□□□□ 0
TPM1-219ENST00000559397 SLC25A12O75746 678 aa15.06■□□□□ 0
TPM1-219ENST00000559397 CCDC159P0C7I6 412 aa15.06■□□□□ 0
TPM1-219ENST00000559397 RPL5P46777 297 aaKnown RBP15.06■□□□□ 0
TPM1-219ENST00000559397 OMPP47874 163 aa15.06■□□□□ 0
TPM1-219ENST00000559397 GSSP48637 474 aa15.06■□□□□ 0
TPM1-219ENST00000559397 CDH15P55291 814 aa15.06■□□□□ 0
TPM1-219ENST00000559397 CXCR4P61073 352 aa15.06■□□□□ 0
TPM1-219ENST00000559397 SNTA1Q13424 505 aa15.06■□□□□ 0
TPM1-219ENST00000559397 PTGES3Q15185 160 aaKnown RBP15.06■□□□□ 0
TPM1-219ENST00000559397 PRAMEF20Q5VT98 475 aa15.06■□□□□ 0
TPM1-219ENST00000559397 SLC25A25Q6KCM7 469 aa15.06■□□□□ 0
TPM1-219ENST00000559397 ZNF730Q6ZMV8 503 aa15.06■□□□□ 0
TPM1-219ENST00000559397 MBOAT2Q6ZWT7 520 aa15.06■□□□□ 0
TPM1-219ENST00000559397 PRICKLE2Q7Z3G6 844 aa15.06■□□□□ 0
TPM1-219ENST00000559397 ZADH2Q8N4Q0 377 aa15.06■□□□□ 0
TPM1-219ENST00000559397 RBMXL3Q8N7X1 1067 aaKnown RBP15.06■□□□□ 0
TPM1-219ENST00000559397 ZNF527Q8NB42 609 aa15.06■□□□□ 0
TPM1-219ENST00000559397 GNPDA2Q8TDQ7 276 aa15.06■□□□□ 0
TPM1-219ENST00000559397 ANGPTL4Q9BY76 406 aa15.06■□□□□ 0
TPM1-219ENST00000559397 TRIM2Q9C040 744 aa15.06■□□□□ 0
TPM1-219ENST00000559397 METTL7AQ9H8H3 244 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms