RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ADAM19Q9H013 955 aa13.8□□□□□ -0.2
NEDD1-213ENST00000557644 hCG_2039718K7EN88 272 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 STAMBPO95630 424 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 MT-ND1P03886 318 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 THY1P04216 161 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 SEMG1P04279 462 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 IFNW1P05000 195 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 EDN3P14138 238 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 SHC1P29353 583 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 KCNC4Q03721 635 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 CRYZQ08257 329 aaKnown RBP13.79□□□□□ -0.2
NEDD1-213ENST00000557644 MTX3Q5HYI7 312 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 VASNQ6EMK4 673 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 AAGABQ6PD74 315 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 SPATA24Q86W54 205 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 ADGRG3Q86Y34 549 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 TIMP4Q99727 224 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 TRIM2Q9C040 744 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 AQP7O14520 342 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 DIRAS1O95057 198 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 PTNP21246 168 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 CHMP24386 653 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 ADH6P28332 368 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 LHX2P50458 406 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 CDH12P55289 794 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 DLX5P56178 289 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 CLDN20P56880 219 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 NHSL2Q5HYW2 709 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 ZGRF1Q86YA3 2104 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 UBQLNLQ8IYU4 475 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 RNF217Q8TC41 542 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 DNAJA3Q96EY1 480 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 SLC47A1Q96FL8 570 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 EVA1AQ9H8M9 152 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 TMEM27Q9HBJ8 222 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 NDUFAF4Q9P032 175 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 RHCGQ9UBD6 479 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 RPS6KB2Q9UBS0 482 aa13.79□□□□□ -0.2
NEDD1-213ENST00000557644 A0A0B4J2E0 115 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 A0A1B0GX12 115 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 FFAR1O14842 300 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 FMO6PO60774 539 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 POU3F2P20265 443 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-213ENST00000557644 SFTPDP35247 375 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 SRYQ05066 204 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 MRPL49Q13405 166 aaKnown RBP13.78□□□□□ -0.2
NEDD1-213ENST00000557644 IQCCQ4KMZ1 466 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 ALG10BQ5I7T1 473 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 ATG4DQ86TL0 474 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-213ENST00000557644 LILRA2Q8N149 483 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 OR5M9Q8NGP3 310 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 TRIM15Q9C019 465 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 TMED7-TICAM2A0A0A6YYA0 188 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 AQP12BA6NM10 295 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 NQO1P15559 274 aaKnown RBP13.78□□□□□ -0.2
NEDD1-213ENST00000557644 PTGS2P35354 604 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 APOBEC1P41238 236 aaKnown RBP13.78□□□□□ -0.2
NEDD1-213ENST00000557644 POLR2HP52434 150 aaKnown RBP13.78□□□□□ -0.2
NEDD1-213ENST00000557644 SUCLG1P53597 346 aaKnown RBP13.78□□□□□ -0.2
NEDD1-213ENST00000557644 CLDN15P56746 228 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 C19orf57Q0VDD7 668 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 AQP12AQ8IXF9 295 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 ADGRG5Q8IZF4 528 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 CANT1Q8WVQ1 401 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 MIB2Q96AX9 1013 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 OR11A1Q9GZK7 315 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 CHRNA9Q9UGM1 479 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 ACAD8Q9UKU7 415 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 SLC7A7Q9UM01 511 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 TMED7Q9Y3B3 224 aa13.78□□□□□ -0.2
NEDD1-213ENST00000557644 TMEM72A0PK05 275 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 SEC14L5O43304 696 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 CIB2O75838 187 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 ACTL6AO96019 429 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 CLDN18P56856 261 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 TAS2R41P59536 307 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 CCNIQ14094 377 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 WDR88Q6ZMY6 472 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 P3H2Q8IVL5 708 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 ST6GALNAC3Q8NDV1 305 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 PNPLA3Q9NST1 481 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 AURKCQ9UQB9 309 aa13.77□□□□□ -0.21
NEDD1-213ENST00000557644 TCRBV3S1A0A5B6 114 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 ZC3H12DA2A288 527 aaKnown RBP13.76□□□□□ -0.21
NEDD1-213ENST00000557644 LYPD3O95274 346 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 ELK4P28324 431 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 GCKP35557 465 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 HTR3AP46098 478 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 RAC1P63000 192 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 SELENBP1Q13228 472 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF613Q6PF04 617 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 ULK3Q6PHR2 472 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 GGNQ86UU5 652 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 SARAFQ96BY9 339 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 SLC41A3Q96GZ6 507 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 WDYHV1Q96HA8 205 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 RIMS3Q9UJD0 308 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms