RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 OR4A15Q8NGL6 344 aa11.74□□□□□ -0.53
TGFB3-204ENST00000556285 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.74□□□□□ -0.53
TGFB3-204ENST00000556285 ZBTB9Q96C00 473 aa11.74□□□□□ -0.53
TGFB3-204ENST00000556285 ZNF350Q9GZX5 532 aa11.74□□□□□ -0.53
TGFB3-204ENST00000556285 SLCO5A1Q9H2Y9 848 aa11.74□□□□□ -0.53
TGFB3-204ENST00000556285 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
TGFB3-204ENST00000556285 AKTIPQ9H8T0 292 aa11.74□□□□□ -0.53
TGFB3-204ENST00000556285 ACER3Q9NUN7 267 aa11.74□□□□□ -0.53
TGFB3-204ENST00000556285 ASIC5Q9NY37 505 aa11.74□□□□□ -0.53
TGFB3-204ENST00000556285 A0A1W2PP18 115 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 PRAMEF27A3QJZ7 478 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 CLDN24A6NM45 220 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 SHISA9B4DS77 424 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 SULT2B1O00204 365 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 ADAM11O75078 769 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 CRLF1O75462 422 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 STX11O75558 287 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 CPSF4O95639 269 aaKnown RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 THBS1P07996 1170 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 PGM1P36871 562 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 FOXG1P55316 489 aaPredicted RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 PPA1Q15181 289 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 TYW3Q6IPR3 259 aaKnown RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 C3orf33Q6P1S2 294 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 TNFAIP8L2Q6P589 184 aaPredicted RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 BHLHB9Q6PI77 547 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 TMPPEQ6ZT21 453 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 C16orf62Q7Z3J2 963 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 ZNF433Q8N7K0 673 aaPredicted RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 FAM71CQ8NEG0 241 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 XAGE5Q8WWM1 108 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 ST8SIA1Q92185 356 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 GTPBP3Q969Y2 492 aaKnown RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 ARL5BQ96KC2 179 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 TRAF4Q9BUZ4 470 aaPredicted RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 REG4Q9BYZ8 158 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 OR11A1Q9GZK7 315 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 NGBQ9NPG2 151 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 MXRA5Q9NR99 2828 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 CTPS2Q9NRF8 586 aa11.73□□□□□ -0.53
TGFB3-204ENST00000556285 CISD1Q9NZ45 108 aaKnown RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 NOP53Q9NZM5 478 aaKnown RBP11.73□□□□□ -0.53
TGFB3-204ENST00000556285 PLCE1Q9P212 2302 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 A0A1W2PR80 420 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 DUXAA6NLW8 204 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 ZNF716A6NP11 495 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 ZNF724A8MTY0 619 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 RNASET2O00584 256 aaKnown RBP11.72□□□□□ -0.53
TGFB3-204ENST00000556285 ANKRD28O15084 1053 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 KIAA0513O60268 411 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 TFPIP10646 304 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 CCNA2P20248 432 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 COX5AP20674 150 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 RYKP34925 604 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 SPOCK1Q08629 439 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 CHI3L2Q15782 390 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 SYT14P1Q58G82 188 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 ABLIM2Q6H8Q1 611 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 DNAJC14Q6Y2X3 702 aaPredicted RBP11.72□□□□□ -0.53
TGFB3-204ENST00000556285 FRRS1Q6ZNA5 592 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 EIF3MQ7L2H7 374 aaKnown RBP11.72□□□□□ -0.53
TGFB3-204ENST00000556285 GALNT5Q7Z7M9 940 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 ZNF100Q8IYN0 542 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 MIPOL1Q8TD10 442 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 AENQ8WTP8 325 aaKnown RBP11.72□□□□□ -0.53
TGFB3-204ENST00000556285 TRMT61AQ96FX7 289 aaKnown RBP11.72□□□□□ -0.53
TGFB3-204ENST00000556285 CCDC106Q9BWC9 280 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 ROPN1BQ9BZX4 212 aaPredicted RBP11.72□□□□□ -0.53
TGFB3-204ENST00000556285 ROPN1Q9HAT0 212 aaPredicted RBP11.72□□□□□ -0.53
TGFB3-204ENST00000556285 SERINC1Q9NRX5 453 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 SVEP1Q4LDE5 3571 aa11.72□□□□□ -0.53
TGFB3-204ENST00000556285 IGKV3D-15A0A087WSY6 115 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 AP3D1O14617 1153 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 ABCD4O14678 606 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 RAD51DO75771 328 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 PGM3O95394 542 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 AK1P00568 194 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 PGCP20142 388 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 IDUAP35475 653 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 ABCE1P61221 599 aaKnown RBP11.71□□□□□ -0.53
TGFB3-204ENST00000556285 CHRNEQ04844 493 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 DMTNQ08495 405 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 MAD2L1Q13257 205 aaPredicted RBP11.71□□□□□ -0.53
TGFB3-204ENST00000556285 SPANXN4Q5MJ08 99 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 SAXO2Q658L1 398 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 EMBQ6PCB8 327 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 DNM1P46Q6ZS02 220 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 MTDHQ86UE4 582 aaKnown RBP11.71□□□□□ -0.53
TGFB3-204ENST00000556285 ADGRG3Q86Y34 549 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 CCDC103Q8IW40 242 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 PHC2Q8IXK0 858 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 OR8J2Q8NGG1 315 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 TMEM234Q8WY98 164 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 CNOT9Q92600 299 aaKnown RBP11.71□□□□□ -0.53
TGFB3-204ENST00000556285 ROPN1LQ96C74 230 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 TEX37Q96LM6 180 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 SORT1Q99523 831 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 DPY30Q9C005 99 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 SAP130Q9H0E3 1048 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms