RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CBFBQ13951 182 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PDK3Q15120 406 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 GABRA6Q16445 453 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 NRF1Q16656 503 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CHRFAM7AQ494W8 412 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SYT14P1Q58G82 188 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 IL23RQ5VWK5 629 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 FBXW9Q5XUX1 488 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZCCHC23Q6ZST2 131 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 GALNT5Q7Z7M9 940 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MTDHQ86UE4 582 aaKnown RBP12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CLECL1Q8IZS7 167 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZNF525Q8N782 197 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CCDC63Q8NA47 563 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ST8SIA1Q92185 356 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZG16BQ96DA0 208 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ARL5BQ96KC2 179 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TNFRSF13CQ96RJ3 184 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CCDC106Q9BWC9 280 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CBLN4Q9NTU7 201 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ACER3Q9NUN7 267 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MKS1Q9NXB0 559 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SLC17A7Q9P2U7 560 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZDHHC2Q9UIJ5 367 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MKLN1Q9UL63 735 aa12.62□□□□□ -0.39
CHMP4BP1-201ENST00000556017 A0A1W2PR80 420 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PRAMEF27A3QJZ7 478 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SMIM23A6NLE4 172 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TMEM114B3SHH9 223 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 RAD51DO75771 328 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SLU7O95391 586 aaKnown RBP12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ITGA5P08648 1049 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CD40P25942 277 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PGM1P36871 562 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZNF83P51522 516 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CCR4P51679 360 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SLC16A1P53985 500 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PHC1P78364 1004 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 H3F3AP84243 136 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 GPR68Q15743 365 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 KRTAP24-1Q3LI83 254 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 AGAP6Q5VW22 663 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 C6orf120Q7Z4R8 191 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TMCO5AQ8N6Q1 288 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 WDR31Q8NA23 367 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 AGR3Q8TD06 166 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MUCL1Q96DR8 90 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 DNAJA3Q96EY1 480 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PPP3R2Q96LZ3 170 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MUS81Q96NY9 551 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 DHRS9Q9BPW9 319 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 RHNO1Q9BSD3 238 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 AMBRA1Q9C0C7 1298 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 BHLHE41Q9C0J9 482 aaPredicted RBP12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ALG2Q9H553 416 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CTPS2Q9NRF8 586 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MALT1Q9UDY8 824 aa12.61□□□□□ -0.39
CHMP4BP1-201ENST00000556017 H7C417 338 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SULT2B1O00204 365 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 LYPLA1O75608 230 aaPredicted RBP12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 LY6HO94772 140 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CHEK2O96017 543 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 KRT16P08779 473 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 UBTFL6P0CB48 400 aaPredicted RBP12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 IGHV4-31P0DP07 118 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 G6PDP11413 515 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 RPL3P39023 403 aaKnown RBP12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 NUDT6P53370 316 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MERTKQ12866 999 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MST1LQ2TV78 715 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 LSM12Q3MHD2 195 aaKnown RBP12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ADGRG3Q86Y34 549 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CCDC103Q8IW40 242 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 ZNF100Q8IYN0 542 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 OR52N5Q8NH56 324 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 OR2W6PQ8NHA6 318 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MIPOL1Q8TD10 442 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 C10orf105Q8TEF2 133 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TMEM158Q8WZ71 300 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 APOPT1Q96IL0 206 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 RADILQ96JH8 1075 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 DUSP26Q9BV47 211 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 OR11A1Q9GZK7 315 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SAP130Q9H0E3 1048 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 FAIMQ9NVQ4 179 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TMEM160Q9NX00 188 aa12.6□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CLDN24A6NM45 220 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 KIAA0513O60268 411 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 STX11O75558 287 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 F12P00748 615 aaPredicted RBP12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CSTAP01040 98 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 IFNA2P01563 188 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PRPS1L1P21108 318 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 MATN1P21941 496 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 PTAFRP25105 342 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 CASP9P55211 416 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 SPDYE7PQ495Y7 208 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 OR4F3Q6IEY1 312 aa12.59□□□□□ -0.39
CHMP4BP1-201ENST00000556017 TYW3Q6IPR3 259 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms