RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ZNF514Q96K75 400 aaPredicted RBP3.22□□□□□ -1.89
TDP1-207ENST00000553617 PPP1R36Q96LQ0 422 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 NSMCE3Q96MG7 304 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 OR4F4Q96R69 305 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 TNFRSF13CQ96RJ3 184 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 LITAFQ99732 161 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 CIB1Q99828 191 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 PELOQ9BRX2 385 aaKnown RBP3.22□□□□□ -1.89
TDP1-207ENST00000553617 TUBGCP2Q9BSJ2 902 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 TMEM43Q9BTV4 400 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 DGCR6LQ9BY27 220 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 POTEKPQ9BYX7 375 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 ANKRD60Q9BZ19 345 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 ROGDIQ9GZN7 287 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 OR51V1Q9H2C8 321 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 GAL3ST2Q9H3Q3 398 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 SAV1Q9H4B6 383 aaPredicted RBP3.22□□□□□ -1.89
TDP1-207ENST00000553617 NT5DC2Q9H857 520 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 WDR41Q9HAD4 459 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 C12orf10Q9HB07 376 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 ZNF160Q9HCG1 818 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 DMAP1Q9NPF5 467 aaPredicted RBP3.22□□□□□ -1.89
TDP1-207ENST00000553617 B3GAT2Q9NPZ5 323 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 C1orf123Q9NWV4 160 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 CLEC5AQ9NY25 188 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 TAS2R7Q9NYW3 318 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 KLRF1Q9NZS2 232 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 THYN1Q9P016 225 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 GHRLQ9UBU3 117 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 ASIC3Q9UHC3 531 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 ADAM28Q9UKQ2 775 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 PAIP2BQ9ULR5 123 aaKnown RBP3.22□□□□□ -1.89
TDP1-207ENST00000553617 PSMD13Q9UNM6 376 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 SAMHD1Q9Y3Z3 626 aaKnown RBP3.22□□□□□ -1.89
TDP1-207ENST00000553617 LRRC42Q9Y546 428 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 LRP12Q9Y561 859 aa3.22□□□□□ -1.89
TDP1-207ENST00000553617 TDRD15B5MCY1 1934 aaKnown RBP3.22□□□□□ -1.89
TDP1-207ENST00000553617 ATP10DQ9P241 1426 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 NCOA3Q9Y6Q9 1424 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 A0A1B0GUH1 482 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 PCP4L1A6NKN8 68 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CENPBD1B2RD01 187 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 K7EQG2 157 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 HAS3O00219 553 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 WWP2O00308 870 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 FOXE1O00358 373 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 BCKDKO14874 412 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 GPAA1O43292 621 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ZSCAN12O43309 604 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ZNF749O43361 778 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 SCN2BO60939 215 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 STX11O75558 287 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CIAO1O76071 339 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 RPP14O95059 124 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 NSA2O95478 260 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 IGSF6O95976 241 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 PLEKP08567 350 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 GSTT2P0CG29 244 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 GSTT2BP0CG30 244 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CALM1P0DP23 149 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CALM2P0DP24 149 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CALM3P0DP25 149 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 MCF2P10911 925 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ZNF26P17031 533 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 CTRB1P17538 263 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 POLR2EP19388 210 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 MX1P20591 662 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 HNF1AP20823 631 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 SAA4P35542 130 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 NAA10P41227 235 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 CCNG1P51959 295 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 RAG2P55895 527 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 C21orf59P57076 290 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 PRPS1P60891 318 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CSNK1G2P78368 415 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ZNF85Q03923 595 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 IFFO1Q0D2I5 559 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 HYAL1Q12794 435 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 SMARCB1Q12824 385 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CAPRIN1Q14444 709 aaKnown RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 EMC2Q15006 297 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 TGFBIQ15582 683 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CD226Q15762 336 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 UAP1Q16222 522 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 ECSCRQ19T08 205 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 XKR4Q5GH76 650 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 BEND6Q5SZJ8 279 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 RAET1LQ5VY80 246 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 TTC23Q5W5X9 447 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 SEL1L3Q68CR1 1132 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ZNF470Q6ECI4 717 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 CTRB2Q6GPI1 263 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 PNCKQ6P2M8 343 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 TTC33Q6PID6 262 aaPredicted RBP3.21□□□□□ -1.9
TDP1-207ENST00000553617 TMIGD1Q6UXZ0 262 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 SYT10Q6XYQ8 523 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 HACD2Q6Y1H2 254 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 ADAMTSL5Q6ZMM2 481 aa3.21□□□□□ -1.9
TDP1-207ENST00000553617 C18orf65Q6ZTR6 163 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms