RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ABCA1O95477 2261 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 USF3Q68DE3 2245 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CPAMD8Q8IZJ3 1885 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SAA2-SAA4A0A096LPE2 208 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 A0A0A6YYC8 382 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 TRGV8A0A0C4DH27 118 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 A0A0J9YVX5 310 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PRSS51A0A1B0GVH4 220 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 GSAPA4D1B5 854 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 LRRD1A4D1F6 860 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 MAGEA13PA6NCF6 341 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 BTNL10A8MVZ5 291 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 DEFB108AA8MXU0 73 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 C9J4A7 227 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 NPIPA5E9PKD4 350 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 H0YIG0 161 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CCDC188H7C350 402 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 TRIM77I1YAP6 450 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 I3L1I5 382 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 HAT1O14929 419 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 STX7O15400 261 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PSTPIP1O43586 416 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 KLHL41O60662 606 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 GALR3O60755 368 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 LDB3O75112 727 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 LY6G6DO95868 133 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SLC16A8O95907 504 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 GOT2P00505 430 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CGAP01215 116 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 C1QAP02745 245 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 IGKV3-11P04433 115 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 TFAP2AP05549 437 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 F7P08709 466 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 H2AFZP0C0S5 128 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SLC35G4P0C7Q5 338 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SAGP10523 405 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 COX6B1P14854 86 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF12P17014 697 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 VCLP18206 1134 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 EPORP19235 508 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 MSH3P20585 1137 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CA4P22748 312 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 IMPA1P29218 277 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PBLDP30039 288 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PPP2R1BP30154 601 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CCKARP32238 428 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 AHRP35869 848 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 COILP38432 576 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PTGDSP41222 190 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 NSG1P42857 185 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SLC1A1P43005 524 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 NPY4RP50391 375 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ASCL1P50553 236 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 HNRNPFP52597 415 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF136P52737 540 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ART1P52961 327 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 EMP2P54851 167 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 NUP107P57740 925 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 VSX2P58304 361 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 BTG2P78543 158 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 IGLV3-21P80748 117 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PLOD1Q02809 727 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 RELQ04864 619 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 EEF1A2Q05639 463 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 LTBQ06643 244 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SCN1BQ07699 218 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 AP1B1Q10567 949 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SNTA1Q13424 505 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF273Q14593 569 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 MESDQ14696 234 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ARHGAP19Q14CB8 494 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 OR1C1Q15619 314 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PPP1R3AQ16821 1122 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PARP6Q2NL67 630 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF791Q3KP31 576 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 ACSBG2Q5FVE4 666 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 TFDP3Q5H9I0 405 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 TCTE1Q5JU00 501 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 AWAT2Q6E213 333 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SLC25A25Q6KCM7 469 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 C11orf63Q6NUN7 778 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CAVIN1Q6NZI2 390 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 TRAT1Q6PIZ9 186 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SUSD1Q6UWL2 747 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PAMR1Q6UXH9 720 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 UNQ6126/PRO20091Q6UXV3 157 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PPP1R21Q6ZMI0 780 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 MEX3BQ6ZN04 569 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 C16orf47Q6ZP98 133 aaPredicted RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 DGAT2L6Q6ZPD8 337 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 MSANTD1Q6ZTZ1 278 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 TMPRSS11FQ6ZWK6 438 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 H2AFVQ71UI9 128 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 Q75L30 129 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 MEPCEQ7L2J0 689 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SPATA21Q7Z572 469 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 CPEB2Q7Z5Q1 589 aaKnown RBP2.1□□□□□ -2.07
CPSF6-207ENST00000551516 PRUNE1Q86TP1 453 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 LUZP1Q86V48 1076 aa2.1□□□□□ -2.07
CPSF6-207ENST00000551516 SATL1Q86VE3 508 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms