RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 JCHAINP01591 159 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 PRSS1P07477 247 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 CCDC172P0C7W6 258 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 PAX1P15863 534 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 GCFC2P16383 781 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 XRCC1P18887 633 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 EIF2S2P20042 333 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 CPN2P22792 545 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 CD1CP29017 333 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 HNRNPH3P31942 346 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 OTX1P32242 354 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 RPL4P36578 427 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 LONP1P36776 959 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 CRYBB2P43320 205 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 CSNK1EP49674 416 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 RAB9AP51151 201 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ACLYP53396 1101 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 MYOM2P54296 1465 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 PLP1P60201 277 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 RPS6P62753 249 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ACY1Q03154 408 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 C1orf61Q13536 156 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 FRMPD4Q14CM0 1322 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 TGFBIQ15582 683 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ALKBH6Q3KRA9 238 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 TP53I3Q53FA7 332 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 HSP90B2PQ58FF3 399 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 AGBL2Q5U5Z8 902 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 TMEM53Q6P2H8 277 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 APOOLQ6UXV4 268 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 HOGA1Q86XE5 327 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 MICU2Q8IYU8 434 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 GTPBP8Q8N3Z3 284 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 AENQ8WTP8 325 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 TM4SF19Q96DZ7 209 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 LRRIQ1Q96JM4 1722 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 SERAC1Q96JX3 654 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 PRRC1Q96M27 445 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 MIA2Q96PC5 1412 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 MTMR9Q96QG7 549 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 TNFRSF13CQ96RJ3 184 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 CLCC1Q96S66 551 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ABCA3Q99758 1704 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ST6GALNAC5Q9BVH7 336 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 MMP28Q9H239 520 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 RGCCQ9H4X1 137 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 NT5DC2Q9H857 520 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ANKRA2Q9H9E1 313 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 NT5MQ9NPB1 228 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ARHGAP35Q9NRY4 1499 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 PEF1Q9UBV8 284 aaKnown RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 SLC7A8Q9UHI5 535 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ZNF221Q9UK13 617 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 THSD7AQ9UPZ6 1657 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 OARD1Q9Y530 152 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 GMPPBQ9Y5P6 360 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ARHGEF28Q8N1W1 1705 aaKnown RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 ADGRB3O60242 1522 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 ADCY9O60503 1353 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 TRAV25A0A0B4J276 109 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 TRBV7-9A0A0J9YWB2 115 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 LOC100653049A0A140TA62 436 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 FRG2CA6NGY1 282 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 MSGN1A6NI15 193 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 TRDMT1O14717 391 aaKnown RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 RGS16O15492 202 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CEACAM4O75871 244 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 KRT34O76011 436 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 AP2A2O94973 939 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 NUDT14O95848 222 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 OR9G9P0C7N8 305 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CFC1BP0CG36 223 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CFC1P0CG37 223 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CD9P21926 228 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 MARK3P27448 753 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 GCAP28676 217 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 ATP5C1P36542 298 aaKnown RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 NAMPTP43490 491 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 DUSP3P51452 185 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 BCAP31P51572 246 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 HADHBP55084 474 aaKnown RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 KRTAP10-3P60369 221 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 ERVK-16P61578 105 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 OC90Q02509 493 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 RIPPLY1Q0D2K3 151 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 KIAA0141Q14154 515 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CRMP1Q14194 572 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CD226Q15762 336 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 MLF2Q15773 248 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 SLC5A12Q1EHB4 618 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 SLC25A52Q3SY17 297 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 HIKESHIQ53FT3 197 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 HSP90AA4PQ58FG1 418 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 FAHD2BQ6P2I3 314 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 GDPD4Q6W3E5 623 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 STOX1Q6ZVD7 989 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 CYS1Q717R9 158 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 PTAR1Q7Z6K3 402 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-210ENST00000547654 IFNEQ86WN2 208 aa3.56□□□□□ -1.84
SCAF11-210ENST00000547654 ERI1Q8IV48 349 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms