RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.53□□□□□ -0.24
CD4-212ENST00000544344 TOR1AIP2Q8NFQ8 470 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 CHMP6Q96FZ7 201 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
CD4-212ENST00000544344 ACTRT3Q9BYD9 372 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 FKRPQ9H9S5 495 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
CD4-212ENST00000544344 CENPVL1A0A0U1RR11 272 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 EXOC1LA0A1B0GW35 172 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 LOC390937A0A1W2PQ73 354 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 H3BQF6 201 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 SULT2B1O00204 365 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 SPRY1O43609 319 aaPredicted RBP13.52□□□□□ -0.25
CD4-212ENST00000544344 UROSP10746 265 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 UBL4AP11441 157 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 CCR4P51679 360 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 SLC16A1P53985 500 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 CSNK2A1P68400 391 aaPredicted RBP13.52□□□□□ -0.25
CD4-212ENST00000544344 CBFBQ13951 182 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 SYT14P1Q58G82 188 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 PDZK1Q5T2W1 519 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 ZYG11AQ6WRX3 759 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 LSRQ86X29 649 aaPredicted RBP13.52□□□□□ -0.25
CD4-212ENST00000544344 TMCO5AQ8N6Q1 288 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 ZNF614Q8N883 585 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 ANKS4BQ8N8V4 417 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 PSMA8Q8TAA3 256 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 ST8SIA1Q92185 356 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 MTERF3Q96E29 417 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 FBXO17Q96EF6 278 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 BPESC1Q9GZL8 116 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 ADAM19Q9H013 955 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 TUBB1Q9H4B7 451 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 SLC17A5Q9NRA2 495 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 FKBP7Q9Y680 259 aa13.52□□□□□ -0.25
CD4-212ENST00000544344 SERINC4A6NH21 518 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 SLC28A1O00337 649 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 CRCPO75575 148 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 GSTA1P08263 222 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 ZSWIM7Q19AV6 140 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 C9orf135Q5VTT2 229 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 CCDC103Q8IW40 242 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 ADAMTS15Q8TE58 950 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 MZB1Q8WU39 189 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 CCDC126Q96EE4 140 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 ARL5BQ96KC2 179 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 SDF2Q99470 211 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 FMO2Q99518 471 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 TRMOQ9BU70 441 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 LAT2Q9GZY6 243 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 ATP6V1HQ9UI12 483 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 MOKQ9UQ07 419 aa13.51□□□□□ -0.25
CD4-212ENST00000544344 LRP5LA4QPB2 252 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 LSM1O15116 133 aaKnown RBP13.5□□□□□ -0.25
CD4-212ENST00000544344 MRPL33O75394 65 aaKnown RBP13.5□□□□□ -0.25
CD4-212ENST00000544344 MYL2P10916 166 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 LAMP1P11279 417 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 BCKDHAP12694 445 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 CASQ1P31415 396 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 IL2RGP31785 369 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 CCT3P49368 545 aaKnown RBP13.5□□□□□ -0.25
CD4-212ENST00000544344 NAA20P61599 178 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 RPL38P63173 70 aaKnown RBP13.5□□□□□ -0.25
CD4-212ENST00000544344 H3F3AP84243 136 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 MERTKQ12866 999 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 TP53BP2Q13625 1128 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 ZNF141Q15928 474 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 RNF165Q6ZSG1 346 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 C17orf78Q8N4C9 275 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 C1orf162Q8NEQ5 155 aaPredicted RBP13.5□□□□□ -0.25
CD4-212ENST00000544344 OR7A2PQ8NGA2 310 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 ACMSDQ8TDX5 336 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 SLC25A43Q8WUT9 341 aaPredicted RBP13.5□□□□□ -0.25
CD4-212ENST00000544344 DNAJA3Q96EY1 480 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 OR7D2Q96RA2 312 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 CCDC106Q9BWC9 280 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 NMUR2Q9GZQ4 415 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 TSPYL1Q9H0U9 437 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 MYOZ1Q9NP98 299 aaPredicted RBP13.5□□□□□ -0.25
CD4-212ENST00000544344 SERINC1Q9NRX5 453 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 SLC7A10Q9NS82 523 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 ACER3Q9NUN7 267 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 DCTN4Q9UJW0 460 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 AMDHD2Q9Y303 409 aa13.5□□□□□ -0.25
CD4-212ENST00000544344 GPR171O14626 319 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 SCAMP2O15127 329 aaKnown RBP13.49□□□□□ -0.25
CD4-212ENST00000544344 KCNAB3O43448 404 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 FCMRO60667 390 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 BCAS1O75363 584 aaPredicted RBP13.49□□□□□ -0.25
CD4-212ENST00000544344 URI1O94763 535 aaPredicted RBP13.49□□□□□ -0.25
CD4-212ENST00000544344 SLU7O95391 586 aaKnown RBP13.49□□□□□ -0.25
CD4-212ENST00000544344 PMS2P2O95744 297 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 PROCP04070 461 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 DNAJB13P59910 316 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 CARTPTQ16568 116 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 IQCCQ4KMZ1 466 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 C12orf54Q6X4T0 127 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 OLIG3Q7RTU3 272 aa13.49□□□□□ -0.25
CD4-212ENST00000544344 OR56A1Q8NGH5 318 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 942.3 ms