RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 GLIPR1L2Q4G1C9 344 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 CFAP157Q5JU67 520 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 HSD11B1LQ7Z5J1 315 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 PHC2Q8IXK0 858 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 LINC01561Q8N1V8 128 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 OR6T1Q8NGN1 323 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 NR4A3Q92570 626 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 WBP1Q96G27 269 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 BOLA2Q9H3K6 86 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 C11orf49Q9H6J7 331 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 ANAPC7Q9UJX3 599 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 BARX2Q9UMQ3 279 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-207ENST00000544052 RNF6Q9Y252 685 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 GSTK1Q9Y2Q3 226 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 MOB4Q9Y3A3 225 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 DDX49Q9Y6V7 483 aaKnown RBP2.95□□□□□ -1.94
SCFD1-207ENST00000544052 ROBO3Q96MS0 1386 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 ASTN1O14525 1302 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 CHD7Q9P2D1 2997 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 IGKV6D-41A0A0C4DH26 115 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 KRTAP16-1A8MUX0 517 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 CLDN5O00501 218 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 ZSCAN12O43309 604 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 BCAS1O75363 584 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-207ENST00000544052 B3GAT3O94766 335 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 IGF1P05019 195 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 ALPIP09923 528 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF883P0CG24 379 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 PVRP15151 417 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 HNF1AP20823 631 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 CHI3L1P36222 383 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-207ENST00000544052 TPD52L1Q16890 204 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-207ENST00000544052 VWA2Q5GFL6 755 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF506Q5JVG8 444 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 LRRC49Q8IUZ0 686 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 LRRC43Q8N309 656 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 SPATA3Q8NHX4 192 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 SENP8Q96LD8 212 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 TRIM51Q9BSJ1 452 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 ELOVL3Q9HB03 270 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 SMC3Q9UQE7 1217 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 MRPS33Q9Y291 106 aaKnown RBP2.94□□□□□ -1.94
SCFD1-207ENST00000544052 OR10H1Q9Y4A9 318 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 CHD9Q3L8U1 2897 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 BAZ2BQ9UIF8 2168 aaKnown RBP2.94□□□□□ -1.94
SCFD1-207ENST00000544052 LOXHD1Q8IVV2 1947 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 A0A0C4DFX4 3053 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 PPIAL4CA0A0B4J2A2 164 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 A0A0J9YWU9 116 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 PPIAL4GP0DN37 164 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 NT5EP21589 574 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 OTX2P32243 289 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 PTGER3P43115 390 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 CBX1P83916 185 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 MS4A2Q01362 244 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 EWSR1Q01844 656 aaKnown RBP eCLIP2.94□□□□□ -1.94
SCFD1-207ENST00000544052 RGS1Q08116 209 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 CYBRD1Q53TN4 286 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 SLC47A2Q86VL8 602 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF440Q8IYI8 595 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 SLC38A6Q8IZM9 456 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 ITLN1Q8WWA0 313 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 CTNNBL1Q8WYA6 563 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-207ENST00000544052 SOSTQ9BQB4 213 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 ANP32EQ9BTT0 268 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 NT5C3AQ9H0P0 336 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 VCPKMTQ9H867 229 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 RAB18Q9NP72 206 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 DHRS4-AS1Q9P1J3 65 aa2.94□□□□□ -1.94
SCFD1-207ENST00000544052 PLIN4Q96Q06 1357 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 GRIN2DO15399 1336 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 TRBV7-9A0A0J9YWB2 115 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 A0A1W2PPR1 153 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 ACOD1A6NK06 481 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF487B1APH4 448 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 SAP18O00422 153 aaKnown RBP2.93□□□□□ -1.94
SCFD1-207ENST00000544052 PHF1O43189 567 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-207ENST00000544052 OPN1LWP04000 364 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 SDC1P18827 310 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 PBLDP30039 288 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-207ENST00000544052 SPIBQ01892 262 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 HYAL1Q12794 435 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 IL24Q13007 206 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 IL18R1Q13478 541 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 GPM6BQ13491 265 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 PEX6Q13608 980 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 ATXN7L3Q14CW9 347 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-207ENST00000544052 GGTA1PQ4G0N0 100 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 ATF7IP2Q5U623 682 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 TTC23Q5W5X9 447 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 KCNIP4Q6PIL6 250 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 TMEM179Q6ZVK1 233 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 TMEM110Q86TL2 294 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 SLC22A18ASQ8N1D0 253 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 ARL14Q8N4G2 192 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 STEAP2Q8NFT2 490 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 CRNKL1Q9BZJ0 848 aaKnown RBP2.93□□□□□ -1.94
SCFD1-207ENST00000544052 TRIM15Q9C019 465 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 GFRA4Q9GZZ7 299 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 FANCFQ9NPI8 374 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms