RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PLA2G7Q13093 441 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 PDLIM3Q53GG5 364 aaPredicted RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 LANCL3Q6ZV70 420 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ADGRF3Q8IZF5 1079 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 CDRT4Q8N9R6 151 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 DMBX1Q8NFW5 382 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 OR52D1Q9H346 318 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 OBP2BQ9NPH6 170 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 SDR39U1Q9NRG7 319 aaPredicted RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 CUTCQ9NTM9 273 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 MRPL22Q9NWU5 206 aaKnown RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 ZCWPW2A0A1B0GU75 182 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 SNRPBP14678 240 aaKnown RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 PCYT2Q99447 389 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 C1QTNF2Q9BXJ5 285 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 KIF25Q9UIL4 384 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 A0A087WUU8 490 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 HMGN2P05204 90 aaKnown RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 EMP2P54851 167 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 DLX5P56178 289 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ARG2P78540 354 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 RDH10Q8IZV5 341 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 PRRC1Q96M27 445 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ELOVL3Q9HB03 270 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 KLHL42Q9P2K6 505 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ZNF443Q9Y2A4 671 aaPredicted RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 A6NHS1 94 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 MSTNO14793 375 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 FZD7O75084 574 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 TP53P04637 393 aaPredicted RBP14.47□□□□□ -0.09
CHD4-210ENST00000544040 GM2AP17900 193 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 CASP3P42574 277 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 HOXA1P49639 335 aaPredicted RBP14.47□□□□□ -0.09
CHD4-210ENST00000544040 SIX1Q15475 284 aaPredicted RBP14.47□□□□□ -0.09
CHD4-210ENST00000544040 SORT1Q99523 831 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 TMEM269A0A1B0GVZ9 245 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 T-ENOLP0DO92 83 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 ITGAMP11215 1152 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 SLC35G1Q2M3R5 365 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 TMEM41BQ5BJD5 291 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 LRRC28Q86X40 367 aaPredicted RBP14.47□□□□□ -0.09
CHD4-210ENST00000544040 SORCS2Q96PQ0 1159 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 DCCP43146 1447 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 NPIPB15A6NHN6 443 aaPredicted RBP14.47□□□□□ -0.09
CHD4-210ENST00000544040 RFXAPO00287 272 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 LPLP06858 475 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 PTGER4P35408 488 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 BAXQ07812 192 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 LEXMQ3ZCV2 418 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 CMPK2Q5EBM0 449 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 SDHAF2Q9NX18 166 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 ABHD17BQ5VST6 288 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 AADACL3Q5VUY0 350 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 OGFOD3Q6PK18 319 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 MAP3K3Q99759 626 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 ACPTQ9BZG2 426 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 FAM155AB1AL88 458 aaPredicted RBP14.47□□□□□ -0.09
CHD4-210ENST00000544040 RAB27BO00194 218 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 F13BP05160 661 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 CHRNEQ04844 493 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 ERV3-1Q14264 604 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 GPR18Q14330 331 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 ZNF169Q14929 603 aaPredicted RBP14.47□□□□□ -0.09
CHD4-210ENST00000544040 DEFB133Q30KQ1 61 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 TMEM201Q5SNT2 666 aa14.47□□□□□ -0.09
CHD4-210ENST00000544040 SNED1Q8TER0 1413 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 D6RAR5 112 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 SNAI1O95863 264 aaPredicted RBP14.46□□□□□ -0.09
CHD4-210ENST00000544040 HOXA9P31269 272 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 SLC6A8P48029 635 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 WDR5P61964 334 aaKnown RBP14.46□□□□□ -0.09
CHD4-210ENST00000544040 IDO2Q6ZQW0 420 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 PDCD1LG2Q9BQ51 273 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 MROH6A6NGR9 719 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 TNFRSF10AO00220 468 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 PPP3CBP16298 524 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 DBPQ10586 325 aaPredicted RBP14.46□□□□□ -0.09
CHD4-210ENST00000544040 LPAL2Q16609 132 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 LAX1Q8IWV1 398 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 CMSS1Q9BQ75 279 aaKnown RBP14.46□□□□□ -0.09
CHD4-210ENST00000544040 CRB3Q9BUF7 120 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 PCDHB10Q9UN67 800 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 TOR1AO14656 332 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 AP1G1O43747 822 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 ENSAO43768 121 aaKnown RBP14.46□□□□□ -0.09
CHD4-210ENST00000544040 FABP6P51161 128 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 MRPS10P82664 201 aaKnown RBP14.46□□□□□ -0.09
CHD4-210ENST00000544040 MDGA1Q8NFP4 955 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 ZNF845Q96IR2 970 aaPredicted RBP14.46□□□□□ -0.09
CHD4-210ENST00000544040 HCAR1Q9BXC0 346 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 SLC22A23A1A5C7 686 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 TRAPPC2LH3BP13 241 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 POU3F2P20265 443 aaPredicted RBP14.46□□□□□ -0.09
CHD4-210ENST00000544040 OR1Q1Q15612 314 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 TMEM244Q5VVB8 128 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 NRARPQ7Z6K4 114 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 CNEP1R1Q8N9A8 125 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 C3orf30Q96M34 536 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 HERPUD2Q9BSE4 406 aa14.46□□□□□ -0.09
CHD4-210ENST00000544040 SLC2A11Q9BYW1 496 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms