RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MYH13Q9UKX3 1938 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 SPTBN5Q9NRC6 3674 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 A0A1W2PNV4 684 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 OR6C65A6NJZ3 312 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 E9PBE3 544 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 GOLGA8SH3BPF8 625 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 PDLIM1O00151 329 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 DYNC1I1O14576 645 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 NXPH4O95158 308 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 IGLV1-44P01699 117 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 BCKDHAP12694 445 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 CYP2B6P20813 491 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 NT5EP21589 574 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 RDXP35241 583 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 TAGLN2P37802 199 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 CAPGP40121 348 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 GRIA1P42261 906 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 SLC1A4P43007 532 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 PGFP49763 221 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 GTF2A1P52655 376 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 RPL23AP62750 156 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 FKBP3Q00688 224 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 BEX3Q00994 111 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 PLOD1Q02809 727 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 CSTF1Q05048 431 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 IFT88Q13099 833 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 FASTKD3Q14CZ7 662 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 MOGAT2Q3SYC2 334 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 ADAMTSL4-AS1Q5T5F5 129 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 REP15Q6BDI9 236 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 PYHIN1Q6K0P9 492 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 HACD2Q6Y1H2 254 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 APTXQ7Z2E3 356 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 HSD11B1LQ7Z5J1 315 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 MOB3BQ86TA1 216 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 PARGQ86W56 976 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 ZFAND4Q86XD8 727 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 RNF130Q86XS8 419 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 TMEM123Q8N131 208 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 LRRC43Q8N309 656 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 BBS5Q8N3I7 341 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 RFESDQ8TAC1 157 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 TBCKQ8TEA7 893 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 TMEM190Q8WZ59 177 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 FRAT1Q92837 279 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 RPL3LQ92901 407 aaKnown RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 BADQ92934 168 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 ADIPOR1Q96A54 375 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 RAB3CQ96E17 227 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 TCEANC2Q96MN5 208 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 TGM7Q96PF1 710 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 PLEKHF1Q96S99 279 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 HSD17B14Q9BPX1 270 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 TUBGCP2Q9BSJ2 902 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 GPN2Q9H9Y4 310 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 ADGRL4Q9HBW9 690 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 ABCC13Q9NSE7 274 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 ZDHHC18Q9NUE0 388 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 UFSP2Q9NUQ7 469 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 PIPOXQ9P0Z9 390 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 MBD2Q9UBB5 411 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 CYTH4Q9UIA0 394 aa3.49□□□□□ -1.85
SNHG1-217ENST00000541578 CAB39Q9Y376 341 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-217ENST00000541578 MYH2Q9UKX2 1941 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 MROH7Q68CQ1 1323 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 MUC3AQ02505 3323 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 TRAV26-1A0A087WT03 109 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 IGHV3-20A0A0C4DH32 117 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 TEX48A0A1B0GUV7 120 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 ARHGEF35A5YM69 484 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 NPIPA7E9PJI5 369 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 H0YHG0 523 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 KLHL41O60662 606 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 SORBS2O94875 1100 aaKnown RBP3.48□□□□□ -1.85
SNHG1-217ENST00000541578 TOXO94900 526 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 HBQ1P09105 142 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 SNRPCP09234 159 aaKnown RBP3.48□□□□□ -1.85
SNHG1-217ENST00000541578 ALOX5P09917 674 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 NPIPA8P0DM63 369 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 CPN1P15169 458 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 SDC1P18827 310 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 MX1P20591 662 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 TBXA2RP21731 343 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 HPCAL1P37235 193 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 NOVA1P51513 510 aaKnown RBP3.48□□□□□ -1.85
SNHG1-217ENST00000541578 HAND2P61296 217 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 EWSR1Q01844 656 aaKnown RBP eCLIP3.48□□□□□ -1.85
SNHG1-217ENST00000541578 FCN2Q15485 313 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 CD226Q15762 336 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 SNAI3Q3KNW1 292 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 MEDAGQ5VYS4 303 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 ACSM5Q6NUN0 579 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 GCNT7Q6ZNI0 430 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 Q6ZRP5 223 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 OTUD6AQ7L8S5 288 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 LRRTM1Q86UE6 522 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 BBOF1Q8ND07 529 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 OR5D13Q8NGL4 314 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 OR8J1Q8NGP2 316 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms