RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ARHGEF39Q8N4T4 335 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 CNOT9Q92600 299 aaKnown RBP8.79□□□□□ -1
CNOT4-212ENST00000541284 GHSRQ92847 366 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 PELI1Q96FA3 418 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 STACQ99469 402 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 H2AFY2Q9P0M6 372 aaPredicted RBP8.79□□□□□ -1
CNOT4-212ENST00000541284 HSPB11Q9Y547 144 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 ZNF860A6NHJ4 632 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 PRR32B1ATL7 298 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 PRR23D1E9PI22 279 aaPredicted RBP8.79□□□□□ -1
CNOT4-212ENST00000541284 STX11O75558 287 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 PRR23D2P0DMB1 279 aaPredicted RBP8.79□□□□□ -1
CNOT4-212ENST00000541284 S1PR1P21453 382 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 NT5EP21589 574 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 ATP6V1E1P36543 226 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 OR3A3P47888 321 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 NRG3P56975 720 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 GGTLC2Q14390 218 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 EXOSC7Q15024 291 aaKnown RBP8.79□□□□□ -1
CNOT4-212ENST00000541284 NTRK2Q16620 822 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 ACSM3Q53FZ2 586 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 TMEM255AQ5JRV8 349 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 PYHIN1Q6K0P9 492 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 ESPNLQ6ZVH7 1005 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 ZNF767PQ75MW2 155 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 MTSS1LQ765P7 747 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 SIAH3Q8IW03 269 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 PIAS4Q8N2W9 510 aaPredicted RBP8.79□□□□□ -1
CNOT4-212ENST00000541284 ZNF655Q8N720 491 aaPredicted RBP8.79□□□□□ -1
CNOT4-212ENST00000541284 OR5T3Q8NGG3 340 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 ANGPTL6Q8NI99 470 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 NDC1Q9BTX1 674 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 HDHD2Q9H0R4 259 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 CD93Q9NPY3 652 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 NUDT15Q9NV35 164 aa8.79□□□□□ -1
CNOT4-212ENST00000541284 PCDHGA9Q9Y5G4 932 aaKnown RBP8.79□□□□□ -1
CNOT4-212ENST00000541284 A0A087WV48 116 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 PRR23AA6NEV1 266 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 PIN1P1O15428 100 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 HCRTR1O43613 425 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 CBX7O95931 251 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 CD3GP09693 182 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 EPXP11678 715 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 SNRPBP14678 240 aaKnown RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 UGT2B7P16662 529 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 PAICSP22234 425 aaKnown RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 IFNA8P32881 189 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 FAM53BQ14153 422 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 KRT33BQ14525 404 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 TCEA2Q15560 299 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 TRAM1Q15629 374 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 KLHL12Q53G59 568 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 FIGNL1Q6PIW4 674 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 UNQ9370/PRO34162Q6UXP9 181 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 SLC2A12Q8TD20 617 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 LCN9Q8WX39 176 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 ANKRD9Q96BM1 317 aaPredicted RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 OR2M4Q96R27 311 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 TNFRSF13CQ96RJ3 184 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 IFT27Q9BW83 186 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 TEX12Q9BXU0 123 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 OR51V1Q9H2C8 321 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 EMC7Q9NPA0 242 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 DNAJB12Q9NXW2 375 aaKnown RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 USP36Q9P275 1121 aaKnown RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 NCKAP1Q9Y2A7 1128 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 CA5BQ9Y2D0 317 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 NPFFR2Q9Y5X5 522 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 H0Y8X5 98 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 J3QLW9 94 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 GSTZ1O43708 216 aaPredicted RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 TCRBP04435 133 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 WNT1P04628 370 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 CA3P07451 260 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 IFI6P09912 130 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 UCHL1P09936 223 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 ZNF19P17023 458 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 COL9A1P20849 921 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 ENPP1P22413 925 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 MAT2AP31153 395 aaKnown RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 LBX1P52954 281 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 PER3P56645 1201 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 HYAL1Q12794 435 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 GSG1Q2KHT4 349 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 ZBTB37Q5TC79 503 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 ANKRD54Q6NXT1 300 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 ZNF613Q6PF04 617 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 GET4Q7L5D6 327 aaPredicted RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 GPALPP1Q8IXQ4 340 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 OR52L1Q8NGH7 329 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 OR51A7Q8NH64 312 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 HGDQ93099 445 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 HYLS1Q96M11 299 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 LYRM4Q9HD34 91 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 ADAP2Q9NPF8 381 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 NPTNQ9Y639 398 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 TRAV6A0A075B6T7 132 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.78□□□□□ -1
CNOT4-212ENST00000541284 A0A1B0GWA3 101 aa8.78□□□□□ -1
CNOT4-212ENST00000541284 NKX2-2O95096 273 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms