RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SMAD2Q15796 467 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 FAM74A1Q5RGS3 127 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 ADNP2Q6IQ32 1131 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 LILRA6Q6PI73 481 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SHFQ7M4L6 423 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 FAM220AQ7Z4H9 259 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 LRRC28Q86X40 367 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 CBARPQ8N350 705 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 OR4K17Q8NGC6 315 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 FOXJ1Q92949 421 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 INTS12Q96CB8 462 aaKnown RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 WDR92Q96MX6 357 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 ERMAPQ96PL5 475 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 SLC17A9Q9BYT1 436 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 REG4Q9BYZ8 158 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 GSX2Q9BZM3 304 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 SHARPINQ9H0F6 387 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 COA4Q9NYJ1 87 aa4.88□□□□□ -1.63
PROM1-220ENST00000540805 NUP210Q8TEM1 1887 aaPredicted RBP4.88□□□□□ -1.63
PROM1-220ENST00000540805 C2orf92A0A1B0GVN3 265 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 POM121BA6NF01 834 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CD8B2A6NJW9 211 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GFYI3L273 518 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 EEF1E1O43324 174 aaKnown RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 CHST10O43529 356 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 FURINP09958 794 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GAAP10253 952 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CD8BP10966 210 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 C6P13671 934 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 F8A1P23610 371 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 AK4P27144 223 aaPredicted RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 NDUFS1P28331 727 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 RBMS1P29558 406 aaKnown RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 CASRP41180 1078 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 MTNR1AP48039 350 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SLC6A11P48066 632 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PUDPQ08623 228 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 ELOCQ15369 112 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 HSD17B12Q53GQ0 312 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PLEKHS1Q5SXH7 462 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 HACD4Q5VWC8 232 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 ACSM5Q6NUN0 579 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 TCTN3Q6NUS6 607 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 FAM198BQ6UWH4 519 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SPRED2Q7Z698 418 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 NUDT13Q86X67 352 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CCDC116Q8IYX3 515 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 LMNTD1Q8N9Z9 388 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CAMKVQ8NCB2 501 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GPR26Q8NDV2 337 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 EDARADDQ8WWZ3 215 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 NKD1Q969G9 470 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GLYATL1Q969I3 302 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 OTUB2Q96DC9 234 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PEX11GQ96HA9 241 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 DGAT2Q96PD7 388 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 OR4K3Q96R72 315 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 UBL7Q96S82 380 aaPredicted RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 TBX5Q99593 518 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 WDR77Q9BQA1 342 aaPredicted RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 DPH7Q9BTV6 452 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 COL25A1Q9BXS0 654 aaPredicted RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 FOXQ1Q9C009 403 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 MRPS18AQ9NVS2 196 aaKnown RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 NKIRAS2Q9NYR9 191 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 NLGN3Q9NZ94 848 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 COPZ2Q9P299 210 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 KIF25Q9UIL4 384 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SCP2D1Q9UJQ7 156 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CLEC4EQ9ULY5 219 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PCNX1Q96RV3 2341 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 MEIKINA0A087WXM9 373 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SHISA3A0PJX4 238 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 FAM221BA6H8Z2 402 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 FAM86C2PA6NEL3 165 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 DNASE2O00115 360 aaPredicted RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 SSNA1O43805 119 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CH25HO95992 272 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 TCRBP04435 133 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 LIMS3P0CW19 117 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 LIMS4P0CW20 117 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CELP19835 753 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 C4BPBP20851 252 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 LCN1P31025 176 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 ACSL1P33121 698 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 BTCP35070 178 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 MMP12P39900 470 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CD79BP40259 229 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SLC1A3P43003 542 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GIPRP48546 466 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 DNASE1L1P49184 302 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GAS1P54826 345 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 NRG3P56975 720 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 ERVK-25P63136 954 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 B4GALNT1Q00973 533 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CLINT1Q14677 625 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 C9orf152Q5JTZ5 239 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 IER5LQ5T953 404 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SLC25A24Q6NUK1 477 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 KLHL24Q6TFL4 600 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms