RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 GPR83Q9NYM4 423 aa22.38■■□□□ 1.17
TTC3-225ENST00000540756 TPRKBQ9Y3C4 175 aa22.38■■□□□ 1.17
TTC3-225ENST00000540756 CDH10Q9Y6N8 788 aa22.38■■□□□ 1.17
TTC3-225ENST00000540756 EFCAB9A8MZ26 197 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 EIF4E2O60573 245 aaKnown RBP22.37■■□□□ 1.17
TTC3-225ENST00000540756 CCNA2P20248 432 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 TACR3P29371 465 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 EFNB1P98172 346 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 DNASE1L3Q13609 305 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 FHL1Q13642 323 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 SSPNQ14714 243 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 POMZP3Q6PJE2 187 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 OR5W2Q8NH69 310 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 FANK1Q8TC84 345 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 GGHQ92820 318 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 TMCO6Q96DC7 493 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 FBXL4Q9UKA2 621 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 CPAMD8Q8IZJ3 1885 aa22.37■■□□□ 1.17
TTC3-225ENST00000540756 ELOA3DA6NLF2 546 aaPredicted RBP22.36■■□□□ 1.17
TTC3-225ENST00000540756 TERTO14746 1132 aaKnown RBP22.36■■□□□ 1.17
TTC3-225ENST00000540756 FBXO45P0C2W1 286 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 NAGAP17050 411 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 SLC1A3P43003 542 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 PCYT1AP49585 367 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 GAS1P54826 345 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 SNAPC1Q16533 368 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 COL28A1Q2UY09 1125 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 ELOA3BQ3SY89 546 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 CDK20Q8IZL9 346 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 ELOA3Q8NG57 546 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 SLC22A8Q8TCC7 542 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 OSTF1Q92882 214 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 PSORS1C1Q9UIG5 152 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 SIGLEC7Q9Y286 467 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 DOCK10Q96BY6 2186 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 A0A1W2PQ72 361 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 CDC40O60508 579 aaKnown RBP eCLIP22.36■■□□□ 1.17
TTC3-225ENST00000540756 IGHEP01854 428 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 CD63P08962 238 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 SNRPGP62308 76 aaKnown RBP22.36■■□□□ 1.17
TTC3-225ENST00000540756 EGR4Q05215 589 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 INPP5JQ15735 1006 aaPredicted RBP22.36■■□□□ 1.17
TTC3-225ENST00000540756 NUP54Q7Z3B4 507 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 B4GALNT2Q8NHY0 566 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 FGF11Q92914 225 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 RELTQ969Z4 430 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 SPACA9Q96E40 222 aaPredicted RBP22.36■■□□□ 1.17
TTC3-225ENST00000540756 DNAJA3Q96EY1 480 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 TNFRSF13CQ96RJ3 184 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 NPAS1Q99742 590 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 ADAM19Q9H013 955 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 CDCP1Q9H5V8 836 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 HHATLQ9HCP6 504 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 ZFHX4Q86UP3 3567 aa22.36■■□□□ 1.17
TTC3-225ENST00000540756 PTPRZ1P23471 2315 aaPredicted RBP22.35■■□□□ 1.17
TTC3-225ENST00000540756 RAD1O60671 282 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 SLC2A10O95528 541 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 MT-ND2P03891 347 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 ADRA2AP08913 450 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 C21orf33P30042 268 aaPredicted RBP22.35■■□□□ 1.17
TTC3-225ENST00000540756 PTGDSP41222 190 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 MAP2K4P45985 399 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 SLC6A8P48029 635 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 P2RX1P51575 399 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 DBPQ10586 325 aaPredicted RBP22.35■■□□□ 1.17
TTC3-225ENST00000540756 ASCL5Q7RTU5 278 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 MRGPREQ86SM8 312 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 OR8J1Q8NGP2 316 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 GPR119Q8TDV5 335 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 UBQLN3Q9H347 655 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 MED11Q9P086 117 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 TMEM5Q9Y2B1 443 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 H3BSA7 217 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 PTP4A3O75365 173 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 CDK4P11802 303 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 PCMT1P22061 227 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 GABREP78334 506 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 NTRK2Q16620 822 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 ZNF791Q3KP31 576 aaPredicted RBP22.35■■□□□ 1.17
TTC3-225ENST00000540756 GXYLT1Q4G148 440 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 IL20RBQ6UXL0 311 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 RNF138Q8WVD3 245 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 POLDIP3Q9BY77 421 aaKnown RBP22.35■■□□□ 1.17
TTC3-225ENST00000540756 PLCXD1Q9NUJ7 323 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 CLN6Q9NWW5 311 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 P4HTMQ9NXG6 502 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 KLRF1Q9NZS2 232 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 IL17BQ9UHF5 180 aa22.35■■□□□ 1.17
TTC3-225ENST00000540756 PTPRBP23467 1997 aa22.34■■□□□ 1.17
TTC3-225ENST00000540756 MPZL2O60487 215 aa22.34■■□□□ 1.17
TTC3-225ENST00000540756 EMX1Q04741 257 aaPredicted RBP22.34■■□□□ 1.17
TTC3-225ENST00000540756 CBFBQ13951 182 aa22.34■■□□□ 1.17
TTC3-225ENST00000540756 QPRTQ15274 297 aa22.34■■□□□ 1.17
TTC3-225ENST00000540756 OAFQ86UD1 273 aa22.34■■□□□ 1.17
TTC3-225ENST00000540756 BRIX1Q8TDN6 353 aaKnown RBP22.34■■□□□ 1.17
TTC3-225ENST00000540756 TTC9Q92623 222 aa22.34■■□□□ 1.17
TTC3-225ENST00000540756 COPS4Q9BT78 406 aa22.34■■□□□ 1.17
TTC3-225ENST00000540756 RBM38Q9H0Z9 239 aaKnown RBP22.34■■□□□ 1.17
TTC3-225ENST00000540756 MCCC2Q9HCC0 563 aa22.34■■□□□ 1.17
TTC3-225ENST00000540756 OSGIN1Q9UJX0 560 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms