RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 THBS2P35442 1172 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 APOBEC1P41238 236 aaKnown RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
COPS7A-211ENST00000540408 MERTKQ12866 999 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 NDUFAF6Q330K2 333 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 PDZK1Q5T2W1 519 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 C11orf71Q6IPW1 123 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF525Q8N782 197 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 OR7A2PQ8NGA2 310 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 PSMA8Q8TAA3 256 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 SFXN5Q8TD22 340 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 MZB1Q8WU39 189 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF75CPQ92670 426 aaPredicted RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 C16orf45Q96MC5 204 aaPredicted RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 SDF2Q99470 211 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 INPP5KQ9BT40 448 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 NMUR2Q9GZQ4 415 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 QRSL1Q9H0R6 528 aaKnown RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 FKRPQ9H9S5 495 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 EML4Q9HC35 981 aaKnown RBP11□□□□□ -0.65
COPS7A-211ENST00000540408 GPATCH2Q9NW75 528 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 TAS2R16Q9NYV7 291 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 DNAJC15Q9Y5T4 150 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 FREM1Q5H8C1 2179 aa11□□□□□ -0.65
COPS7A-211ENST00000540408 IGKV3D-15A0A087WSY6 115 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 A0A096LNT2 108 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 NPIPB9F8W1W9 429 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 TRIM13O60858 407 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 H6PDO95479 791 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 C6orf47O95873 294 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 AK1P00568 194 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 CSTAP01040 98 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 FGF4P08620 206 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 LAMP1P11279 417 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 SRD5A1P18405 259 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 HNF1AP20823 631 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 APOBEC3AP31941 199 aaPredicted RBP10.99□□□□□ -0.65
COPS7A-211ENST00000540408 GZMKP49863 264 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 EFNA4P52798 201 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 SESN3P58005 492 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 GPR68Q15743 365 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 SYT14P1Q58G82 188 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 KANK2Q63ZY3 851 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 EIF3MQ7L2H7 374 aaKnown RBP10.99□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF563Q8TA94 476 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 PIGXQ8TBF5 258 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 TWIST2Q8WVJ9 160 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 HTRA1Q92743 480 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 MUS81Q96NY9 551 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 OR7D2Q96RA2 312 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 TUBB1Q9H4B7 451 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 MANSC1Q9H8J5 431 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 KCNS2Q9ULS6 477 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 TRAF6Q9Y4K3 522 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 SLC25A15Q9Y619 301 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 ATP23Q9Y6H3 246 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 KCNE3Q9Y6H6 103 aa10.99□□□□□ -0.65
COPS7A-211ENST00000540408 A0A1W2PR80 420 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 ESPNB1AK53 854 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 ANKRD28O15084 1053 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 PEX11AO75192 247 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 STX11O75558 287 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 KRT4P19013 534 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 PRPS1L1P21108 318 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 MATN1P21941 496 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 EDNRAP25101 427 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 SOAT1P35610 550 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 MAGEA8P43361 318 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 TGFBR3Q03167 851 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 SKP2Q13309 424 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF141Q15928 474 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 ATP6AP1LQ52LC2 224 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 C1QTNF12Q5T7M4 302 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 FAM166AQ6J272 317 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 C10orf107Q8IVU9 208 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 C10orf105Q8TEF2 133 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 GATA5Q9BWX5 397 aaPredicted RBP10.98□□□□□ -0.65
COPS7A-211ENST00000540408 BHLHE41Q9C0J9 482 aaPredicted RBP10.98□□□□□ -0.65
COPS7A-211ENST00000540408 PPCSQ9HAB8 311 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 ACER3Q9NUN7 267 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 EXD2Q9NVH0 621 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 PARPBPQ9NWS1 579 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 UPB1Q9UBR1 384 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 AMDHD2Q9Y303 409 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 HDGFL3Q9Y3E1 203 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 FKBP7Q9Y680 259 aa10.98□□□□□ -0.65
COPS7A-211ENST00000540408 CADP27708 2225 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 PIP5K1BO14986 540 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 DNPH1O43598 174 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 DNAJA2O60884 412 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 PMS2P2O95744 297 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 UBTFL6P0CB48 400 aaPredicted RBP10.97□□□□□ -0.65
COPS7A-211ENST00000540408 IGHV4-31P0DP07 118 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF16P17020 682 aaPredicted RBP10.97□□□□□ -0.65
COPS7A-211ENST00000540408 CLK1P49759 484 aaKnown RBP10.97□□□□□ -0.65
COPS7A-211ENST00000540408 SPOCK1Q08629 439 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 PTGR1Q14914 329 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 GABRA6Q16445 453 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 KRTAP24-1Q3LI83 254 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 LIPNQ5VXI9 398 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms