RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 UBL3O95164 117 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 EPXP11678 715 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 PEBP1P30086 187 aaKnown RBP18.77■□□□□ 0.59
TMEM260-203ENST00000539559 NAA10P41227 235 aaPredicted RBP18.77■□□□□ 0.59
TMEM260-203ENST00000539559 VEGFCP49767 419 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 ELAVL3Q14576 367 aaKnown RBP18.77■□□□□ 0.59
TMEM260-203ENST00000539559 MFSD13AQ14CX5 517 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 OR1Q1Q15612 314 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 TRMT12Q53H54 448 aaKnown RBP18.77■□□□□ 0.59
TMEM260-203ENST00000539559 MS4A15Q8N5U1 240 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 ZNF671Q8TAW3 534 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 PDCD1LG2Q9BQ51 273 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 TMEM168Q9H0V1 697 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 C20orf85Q9H1P6 137 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 KCNE5Q9UJ90 142 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 NUP50Q9UKX7 468 aa18.77■□□□□ 0.59
TMEM260-203ENST00000539559 LRRN3E7EW58 273 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 RGS11O94810 467 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 ADH1CP00326 375 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 POLR2CP19387 275 aaPredicted RBP18.76■□□□□ 0.59
TMEM260-203ENST00000539559 CLDN12P56749 244 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 MRPL2Q5T653 305 aaKnown RBP18.76■□□□□ 0.59
TMEM260-203ENST00000539559 LINGO2Q7L985 606 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 LNX2Q8N448 690 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 TMIEQ8NEW7 156 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 ZCCHC10Q8TBK6 192 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 NR4A3Q92570 626 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 SEC22CQ9BRL7 303 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 LRRN3Q9H3W5 708 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 SYNDIG1Q9H7V2 258 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 ADAP2Q9NPF8 381 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 PSMD9O00233 223 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 GNB5O14775 395 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 PAK4O96013 591 aaPredicted RBP18.76■□□□□ 0.59
TMEM260-203ENST00000539559 PSMB10P40306 273 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 MMP15P51511 669 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 BLVRAP53004 296 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 KLF9Q13886 244 aaPredicted RBP18.76■□□□□ 0.59
TMEM260-203ENST00000539559 TMEM52BQ4KMG9 183 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 HES5Q5TA89 166 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 FIGNL1Q6PIW4 674 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 BTN2A1Q7KYR7 527 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 TPRA1Q86W33 373 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 OR2T4Q8NH00 348 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 MOAP1Q96BY2 351 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 FN3KQ9H479 309 aa18.76■□□□□ 0.59
TMEM260-203ENST00000539559 MTHFD2LQ9H903 347 aaPredicted RBP18.76■□□□□ 0.59
TMEM260-203ENST00000539559 FAM86C2PA6NEL3 165 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 IFNA7P01567 189 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 TSPAN5P62079 268 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 EEF1A1P68104 462 aaKnown RBP18.75■□□□□ 0.59
TMEM260-203ENST00000539559 C9orf50Q5SZB4 431 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 DMKNQ6E0U4 476 aaPredicted RBP18.75■□□□□ 0.59
TMEM260-203ENST00000539559 OR2L3Q8NG85 312 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 HAVCR2Q8TDQ0 301 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 HGDQ93099 445 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 BPIFA2Q96DR5 249 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 ZNF436Q9C0F3 470 aaPredicted RBP18.75■□□□□ 0.59
TMEM260-203ENST00000539559 SLC25A18Q9H1K4 315 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 CMC2Q9NRP2 79 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 SPATA2Q9UM82 520 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 A0A087WV48 116 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 EDDM13A0A1B0GTR0 161 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 TEX51A0A1B0GUA7 166 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 TRAPPC13A5PLN9 417 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 IMPA2O14732 288 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 GATBO75879 557 aaKnown RBP18.75■□□□□ 0.59
TMEM260-203ENST00000539559 ZNF888P0CJ79 500 aaPredicted RBP18.75■□□□□ 0.59
TMEM260-203ENST00000539559 HEPHL1Q6MZM0 1159 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 ADAMTSL4Q6UY14 1074 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 SDF2Q99470 211 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 CERS4Q9HA82 394 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 MEPEQ9NQ76 525 aaPredicted RBP18.75■□□□□ 0.59
TMEM260-203ENST00000539559 ST6GALNAC2Q9UJ37 374 aa18.75■□□□□ 0.59
TMEM260-203ENST00000539559 OR5K3A6NET4 321 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 ZNF860A6NHJ4 632 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 SLC22A31A6NKX4 558 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 ALDOBP05062 364 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 NDUFS1P28331 727 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 STPG1Q5TH74 334 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 CMTM4Q8IZR5 234 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 OR11G2Q8NGC1 345 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 WFIKKN2Q8TEU8 576 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 SCP2D1Q9UJQ7 156 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 SIGLEC7Q9Y286 467 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 TSPAN4O14817 238 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 TFP02787 698 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 ATF4P18848 351 aaPredicted RBP18.74■□□□□ 0.59
TMEM260-203ENST00000539559 VASPP50552 380 aaPredicted RBP18.74■□□□□ 0.59
TMEM260-203ENST00000539559 CLLU1Q5K131 121 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 NRROSQ86YC3 692 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 RAB42Q8N4Z0 105 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 ZNF614Q8N883 585 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 TTLQ8NG68 377 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 TNFRSF13CQ96RJ3 184 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 ZNF559Q9BR84 538 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 PITHD1Q9GZP4 211 aaPredicted RBP18.74■□□□□ 0.59
TMEM260-203ENST00000539559 CA10Q9NS85 328 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 RDH8Q9NYR8 311 aa18.74■□□□□ 0.59
TMEM260-203ENST00000539559 IDSB3KWA1 339 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms