RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 FAF1Q9UNN5 650 aaPredicted RBP6.33□□□□□ -1.4
YBX3-206ENST00000536823 FLNAP21333 2647 aaKnown RBP6.33□□□□□ -1.4
YBX3-206ENST00000536823 HEATR5AQ86XA9 2040 aa6.33□□□□□ -1.4
YBX3-206ENST00000536823 PRR14LQ5THK1 2151 aa6.33□□□□□ -1.4
YBX3-206ENST00000536823 ARID1AO14497 2285 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 MED13LQ71F56 2210 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 A0A087WZY1 265 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 RNF103-CHMP3A0A140T963 221 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 A0A1W2PNV4 684 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 SLC22A20A6NK97 555 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 NPIPB9F8W1W9 429 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 SCDO00767 359 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 SDHDO14521 159 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 ANKRD28O15084 1053 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 HDAC3O15379 428 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 CFLARO15519 480 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 SEC14L5O43304 696 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 SNNO75324 88 aaPredicted RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 TGM6O95932 706 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 AK1P00568 194 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 CRHP06850 196 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 HPGDP15428 266 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 LBPP18428 481 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 ATP6V1C1P21283 382 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 UQCRC1P31930 480 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 KIR2DL3P43628 341 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 AGFG1P52594 562 aaKnown RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 CLNS1AP54105 237 aaKnown RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 SLC18A1P54219 525 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 CLDN15P56746 228 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 EEFSECP57772 596 aaKnown RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 MAGOHP61326 146 aaKnown RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 SORDQ00796 357 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 FOXF2Q12947 444 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 KLF10Q13118 480 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 CD226Q15762 336 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 PLPPR5Q32ZL2 321 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 FLYWCH1Q4VC44 716 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 DCST2Q5T1A1 773 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 BHLHB9Q6PI77 547 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 PLXDC2Q6UX71 529 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 CHMP1BQ7LBR1 199 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 CLECL1Q8IZS7 167 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 GCNT2Q8N0V5 402 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 GTPBP8Q8N3Z3 284 aaPredicted RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 METTL25Q8N6Q8 603 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 ZNF527Q8NB42 609 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 OR8J2Q8NGG1 315 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 OR5M1Q8NGP8 315 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 OR5AK3PQ8NH89 298 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 RAB3IL1Q8TBN0 382 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 MGARPQ8TDB4 240 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 ACTRT2Q8TDY3 377 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 ADAMTS15Q8TE58 950 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 FAM222BQ8WU58 562 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 SMPDL3BQ92485 455 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 INTS12Q96CB8 462 aaKnown RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 SH3YL1Q96HL8 342 aaPredicted RBP6.32□□□□□ -1.4
YBX3-206ENST00000536823 SLC35G5Q96KT7 338 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 PIGMQ9H3S5 423 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 SERHL2Q9H4I8 314 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 TMBIM4Q9HC24 238 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 MED17Q9NVC6 651 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 PNPOQ9NVS9 261 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 THAP1Q9NVV9 213 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 FBXO34Q9NWN3 711 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 NKIRAS1Q9NYS0 192 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 JKAMPQ9P055 326 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 ZNF337Q9Y3M9 751 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 ZNF175Q9Y473 711 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 AP4B1Q9Y6B7 739 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 KCNE3Q9Y6H6 103 aa6.32□□□□□ -1.4
YBX3-206ENST00000536823 PRRC2AP48634 2157 aaKnown RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 NPIPA5A0A0B4J1W7 369 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 PRSS51A0A1B0GVH4 220 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 TRPC5OSA6NMA1 111 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 E9PBE3 544 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 NPIPA7E9PJI5 369 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 H0YC42 278 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 H3BML4 177 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 GMFGO60234 142 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 SCN2BO60939 215 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 ALDOCP09972 364 aaKnown RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 NPIPA8P0DM63 369 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 FCGR2AP12318 317 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 ZNF41P51814 821 aaPredicted RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 SUCLG1P53597 346 aaKnown RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 ATP12AP54707 1039 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 TPD52P55327 224 aaPredicted RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 SUMO3P55854 103 aaPredicted RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 CLDN20P56880 219 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 RPS3AP61247 264 aaKnown RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 EEF1A1P68104 462 aaKnown RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 PHC1P78364 1004 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 OCRLQ01968 901 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 ZNF117Q03924 483 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 CASP8Q14790 479 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 KLHL26Q53HC5 615 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 SPANXN4Q5MJ08 99 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms