RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SHC1P29353 583 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 S100A3P33764 101 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 RPL14P50914 215 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 NUDT6P53370 316 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 SESN3P58005 492 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 OR2B6P58173 313 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 C21orf58P58505 322 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 ABCE1P61221 599 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 COPZ1P61923 177 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 TSC22D1Q15714 1073 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 CHI3L2Q15782 390 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 TOMM34Q15785 309 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 NDUFAF6Q330K2 333 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 EXOSC6Q5RKV6 272 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 FBXW9Q5XUX1 488 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 FBXL14Q8N1E6 418 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 OR8J2Q8NGG1 315 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 RAB3IL1Q8TBN0 382 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 PMM1Q92871 262 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 NPAS1Q99742 590 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 PAIP2Q9BPZ3 127 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 COQ10BQ9H8M1 238 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 ANKZF1Q9H8Y5 726 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 FKRPQ9H9S5 495 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 KCNK9Q9NPC2 374 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 CHRNA9Q9UGM1 479 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 RAP2CQ9Y3L5 183 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 DSCAMO60469 2012 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 NAV3Q8IVL0 2385 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 ACANP16112 2415 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 C9JVG2 144 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 ABCD4O14678 606 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 TM9SF1O15321 606 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 RAD51DO75771 328 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 UGT2B17O75795 530 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 OR12D1P0DN82 309 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 IL7RP16871 459 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 LOXP28300 417 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 CDKN1AP38936 164 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 MAP2K6P52564 334 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 DSCR9P59020 149 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 SLC35A1P78382 337 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 CHRNEQ04844 493 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 CHRNB3Q05901 458 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF844Q08AG5 666 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 SKP2Q13309 424 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 TNK1Q13470 666 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 PDK3Q15120 406 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 TNFAIP8L2Q6P589 184 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 CLEC2AQ6UVW9 174 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 C22orf34Q6ZV56 151 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 ABHD12BQ7Z5M8 362 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 CMIPQ8IY22 773 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 LRRC34Q8IZ02 419 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 CLECL1Q8IZS7 167 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 KBTBD8Q8NFY9 601 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF775Q96BV0 537 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 ROPN1LQ96C74 230 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 C3orf30Q96M34 536 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 PANX1Q96RD7 426 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 SLC35A5Q9BS91 424 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF350Q9GZX5 532 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 QRSL1Q9H0R6 528 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 TAS2R16Q9NYV7 291 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 SLC9A8Q9Y2E8 581 aa11.74□□□□□ -0.53
CLSTN3-205ENST00000535452 OR5H1A6NKK0 313 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 E9PBE3 544 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 NPIPB9F8W1W9 429 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 SMAD9O15198 467 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 TLX2O43763 284 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 KIAA0513O60268 411 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 ANP32DO95626 131 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 KRT75O95678 551 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 PMS2P2O95744 297 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 GUSBP08236 651 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 GTF2E2P29084 291 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 SLC1A6P48664 564 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 KCNJ10P78508 379 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 STX3Q13277 289 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 RAB35Q15286 201 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 HHATQ5VTY9 493 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 CASP12Q6UXS9 341 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 ANKRD46Q86W74 232 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 RIMKLAQ8IXN7 391 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 PEX5LQ8IYB4 626 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF440Q8IYI8 595 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 TAPBPLQ9BX59 468 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 REG4Q9BYZ8 158 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 AKTIPQ9H8T0 292 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 EXOSC3Q9NQT5 275 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 CALML5Q9NZT1 146 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 TMEM181Q9P2C4 612 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 PRSS50Q9UI38 385 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 KCNE3Q9Y6H6 103 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 PMF1-BGLAPU3KQ54 211 aa11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-205ENST00000535452 ARID1AO14497 2285 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms