RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 GPAT3Q53EU6 434 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 ANKRD34AQ69YU3 496 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 EPGNQ6UW88 154 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 TFAP2EQ6VUC0 442 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 MSANTD1Q6ZTZ1 278 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 BEND4Q6ZU67 534 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 NUFIP2Q7Z417 695 aaKnown RBP12.51□□□□□ -0.41
SF3B2-215ENST00000534307 HMGN2P46Q86SG4 172 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 TUSC5Q8IXB3 177 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 GABRG1Q8N1C3 465 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 SLC43A2Q8N370 569 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 OR9I1Q8NGQ6 314 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 TMEM234Q8WY98 164 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 KLHL4Q9C0H6 718 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 OR10A4Q9H209 315 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 C12orf49Q9H741 205 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 BCO1Q9HAY6 547 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 USH1CQ9Y6N9 552 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 NBEAL1Q6ZS30 2694 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 SMAD9O15198 467 aaKnown RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 UBDO15205 165 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 CYTIPO60759 359 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 GCM2O75603 506 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 YES1P07947 543 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 PPP3CBP16298 524 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 PSMB1P20618 241 aaKnown RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 HPCAP84074 193 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 MERTKQ12866 999 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 KEAP1Q14145 624 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 SYT14P1Q58G82 188 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 DNAJC14Q6Y2X3 702 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 CXorf67Q86X51 503 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 CMIPQ8IY22 773 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 PNPT1Q8TCS8 783 aaKnown RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 NANOS1Q8WY41 292 aaKnown RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 CNOT9Q92600 299 aaKnown RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 PMM1Q92871 262 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 REXO5Q96IC2 774 aaKnown RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 ATP6V1G3Q96LB4 118 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 OR5B2Q96R09 309 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 PSD2Q9BQI7 771 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 SLCO1B3Q9NPD5 702 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-215ENST00000534307 GPR52Q9Y2T5 361 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 DSPPQ9NZW4 1301 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 PRR14LQ5THK1 2151 aa12.5□□□□□ -0.41
SF3B2-215ENST00000534307 IGHV3-15A0A0B4J1V0 119 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 KLF4O43474 513 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 PRKD3O94806 890 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 KRT75O95678 551 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 HOXB9P17482 250 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-215ENST00000534307 APOBEC1P41238 236 aaKnown RBP12.49□□□□□ -0.41
SF3B2-215ENST00000534307 DIO1P49895 249 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 ANXA11P50995 505 aaKnown RBP12.49□□□□□ -0.41
SF3B2-215ENST00000534307 POLR2JP52435 117 aaKnown RBP12.49□□□□□ -0.41
SF3B2-215ENST00000534307 LTBQ06643 244 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 GTDC1Q4AE62 458 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 TMEM201Q5SNT2 666 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 ABLIM2Q6H8Q1 611 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 TMPPEQ6ZT21 453 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 GRINAQ7Z429 371 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 STK32CQ86UX6 486 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 ADGRG3Q86Y34 549 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 KRTAP1-3Q8IUG1 177 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 ARFGAP2Q8N6H7 521 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 VPS33AQ96AX1 596 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 PIK3IP1Q96FE7 263 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 ZC3HAV1LQ96H79 300 aaKnown RBP12.49□□□□□ -0.41
SF3B2-215ENST00000534307 MDFIQ99750 246 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 ACTR6Q9GZN1 396 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 MTHFD2LQ9H903 347 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-215ENST00000534307 CTPS2Q9NRF8 586 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 SERINC1Q9NRX5 453 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 KLHL9Q9P2J3 617 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 CHRNA9Q9UGM1 479 aa12.49□□□□□ -0.41
SF3B2-215ENST00000534307 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 FAM234BA2RU67 622 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 ZNF814B7Z6K7 855 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 FAAHO00519 579 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 AP3D1O14617 1153 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 SASH3O75995 380 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 TGDSO95455 350 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 FESP07332 822 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 TFPTP0C1Z6 253 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 NR2F1P10589 423 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 ETFAP13804 333 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 RYKP34925 604 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 ADAM8P78325 824 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 MIER2Q8N344 545 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 GTF2H4Q92759 462 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 AURKBQ96GD4 344 aaPredicted RBP12.48□□□□□ -0.41
SF3B2-215ENST00000534307 ITCHQ96J02 903 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 ARL5BQ96KC2 179 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 TACO1Q9BSH4 297 aaKnown RBP12.48□□□□□ -0.41
SF3B2-215ENST00000534307 PAIP1Q9H074 479 aaKnown RBP12.48□□□□□ -0.41
SF3B2-215ENST00000534307 TPT1P8Q9HAU6 139 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms