RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 UBTD1Q9HAC8 227 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 ACER3Q9NUN7 267 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF446Q9NWS9 450 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 NKIRAS1Q9NYS0 192 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 FOXD3Q9UJU5 478 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 PCDHGB4Q9UN71 923 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 GPC6Q9Y625 555 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-215ENST00000533946 ABCA2Q9BZC7 2435 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 DNHD1Q96M86 4753 aa8.55□□□□□ -1.04
SSBP3-215ENST00000533946 NSD1Q96L73 2696 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-215ENST00000533946 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-215ENST00000533946 A0A1W2PR80 420 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 AGAP5A6NIR3 686 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 TRPC5OSA6NMA1 111 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF716A6NP11 495 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 RFXANKO14593 260 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 UBDO15205 165 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 TPST1O60507 370 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 PLGP00747 810 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-215ENST00000533946 ADAP00813 363 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 KRT16P08779 473 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 H2AFXP16104 143 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-215ENST00000533946 DIO1P49895 249 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 AQP5P55064 265 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 CTBP2P56545 445 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 CBFBQ13951 182 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 MRPL2Q5T653 305 aaKnown RBP8.54□□□□□ -1.04
SSBP3-215ENST00000533946 ATG16L1Q676U5 607 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 EIF3MQ7L2H7 374 aaKnown RBP8.54□□□□□ -1.04
SSBP3-215ENST00000533946 P3H2Q8IVL5 708 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 NATD1Q8N6N6 113 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 FOXC2Q99958 501 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 ACTR6Q9GZN1 396 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 TPT1P8Q9HAU6 139 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 DLL4Q9NR61 685 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 SEC14L4Q9UDX3 406 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 OSGIN1Q9UJX0 560 aa8.54□□□□□ -1.04
SSBP3-215ENST00000533946 MCTS1Q9ULC4 181 aaKnown RBP8.54□□□□□ -1.04
SSBP3-215ENST00000533946 CUBNO60494 3623 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 FN1P02751 2386 aaKnown RBP8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TMED7-TICAM2A0A0A6YYA0 188 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 DUXAA6NLW8 204 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 H3BNH8 94 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 NR5A2O00482 541 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 KLF11O14901 512 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 ERLIN1O75477 346 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 LYZL6O75951 148 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 PRKD3O94806 890 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 RAF1P04049 648 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 BCHEP06276 602 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 NR2F1P10589 423 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 IGHV1-2P23083 117 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 ME2P23368 584 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 DNASE1P24855 282 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 ELK4P28324 431 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 ADH6P28332 368 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TACR3P29371 465 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 ADSLP30566 484 aaPredicted RBP8.53□□□□□ -1.04
SSBP3-215ENST00000533946 EIF1P41567 113 aaKnown RBP8.53□□□□□ -1.04
SSBP3-215ENST00000533946 CRATP43155 626 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 SUMO3P55854 103 aaPredicted RBP8.53□□□□□ -1.04
SSBP3-215ENST00000533946 EEF1A1P68104 462 aaKnown RBP8.53□□□□□ -1.04
SSBP3-215ENST00000533946 RASGEF1BQ0VAM2 473 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 SELENBP1Q13228 472 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TAB1Q15750 504 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 DEFB113Q30KQ7 82 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 SYT14P1Q58G82 188 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 LRRC74BQ6ZQY2 392 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TMPPEQ6ZT21 453 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 SERPINA11Q86U17 422 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 RETREG3Q86VR2 466 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TGIF2LYQ8IUE0 185 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TOR1AIP2Q8NFQ8 470 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 IGFBPL1Q8WX77 278 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 PLPPR2Q96GM1 343 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TMEM19Q96HH6 336 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TRNT1Q96Q11 434 aaKnown RBP8.53□□□□□ -1.04
SSBP3-215ENST00000533946 ACBD3Q9H3P7 528 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 EXD2Q9NVH0 621 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 ELOVL5Q9NYP7 299 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 NPAP1Q9NZP6 1156 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 ZIM2Q9NZV7 527 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 VAPAQ9P0L0 249 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 TMED7Q9Y3B3 224 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 DSPPQ9NZW4 1301 aa8.53□□□□□ -1.04
SSBP3-215ENST00000533946 CSPG4Q6UVK1 2322 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 TRBV5-3A0A0A0MS03 114 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 FAM234BA2RU67 622 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 DPRXA6NFQ7 191 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 TPST2O60704 377 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 CYTIPO60759 359 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 YES1P07947 543 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 TFPIP10646 304 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 IDO1P14902 403 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 SLC7A1P30825 629 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 HOXC12P31275 282 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 NR1H2P55055 460 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 OR2B6P58173 313 aa8.52□□□□□ -1.05
SSBP3-215ENST00000533946 RAC3P60763 192 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms