RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 ERVK13-1Q9NX77 482 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 HS3ST3A1Q9Y663 406 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.17□□□□□ -1.1
CTNND1-232ENST00000532649 FAM230AA0A1W2PPH8 454 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 FMO6PO60774 539 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 HPRP00739 348 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 SRFP11831 508 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 CPT2P23786 658 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 UBE2G2P60604 165 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 ADARB1P78563 741 aaKnown RBP8.17□□□□□ -1.1
CTNND1-232ENST00000532649 NKPD1Q17RQ9 610 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 CCNJQ5T5M9 372 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 BRICD5Q6PL45 260 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 RBMS3Q6XE24 437 aaKnown RBP8.17□□□□□ -1.1
CTNND1-232ENST00000532649 OR4K5Q8NGD3 323 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 PDXPQ96GD0 296 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 SLC30A3Q99726 388 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 ZNF223Q9UK11 482 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-232ENST00000532649 SLC7A7Q9UM01 511 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 PLEKHM1Q9Y4G2 1056 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 A6NIZ1 184 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 SEC14L2O76054 403 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 SERPINA5P05154 406 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 CKMT1AP12532 417 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 PTGER4P35408 488 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 CPOXP36551 454 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 ACVR1BP36896 505 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 RAP1BP61224 184 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 RAP1AP62834 184 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 DBPQ10586 325 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-232ENST00000532649 LCN8Q6JVE9 175 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 TUBB1Q9H4B7 451 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 MBNL1Q9NR56 388 aaKnown RBP8.17□□□□□ -1.1
CTNND1-232ENST00000532649 RNF6Q9Y252 685 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 RNF212BA8MTL3 300 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 H0YAE9 185 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 WDPCPO95876 746 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 UBL4AP11441 157 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 CAV2P51636 162 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 F2RL1P55085 397 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 CTXN1P60606 82 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 SLX4IPQ5VYV7 408 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 VRK3Q8IV63 474 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 FAM160A2Q8N612 972 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-232ENST00000532649 L3MBTL4Q8NA19 623 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 OR4K13Q8NH42 304 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 FKBP10Q96AY3 582 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 BOD1Q96IK1 185 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 C3orf30Q96M34 536 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 FEVQ99581 238 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 VRK1Q99986 396 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-232ENST00000532649 FOXQ1Q9C009 403 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 PLEKHJ1Q9NW61 149 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 PCDHGA7Q9Y5G6 932 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 ENPP4Q9Y6X5 453 aa8.17□□□□□ -1.1
CTNND1-232ENST00000532649 CELP19835 753 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 GABRR1P24046 479 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 GABRB3P28472 473 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 CCR2P41597 374 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 SLC6A8P48029 635 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 NPBWR1P48145 328 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 GSK3AP49840 483 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 INHBCP55103 352 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 NKX6-1P78426 367 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-232ENST00000532649 SF3A2Q15428 464 aaKnown RBP8.16□□□□□ -1.1
CTNND1-232ENST00000532649 VHLLQ6RSH7 139 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 IL20RBQ6UXL0 311 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 OR8J1Q8NGP2 316 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 ADOQ96SZ5 270 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 SMCO4Q9NRQ5 59 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 PTTG2Q9NZH5 202 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 CDC14CA4D256 554 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 C2CD4DB7Z1M9 353 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 FRS3O43559 492 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 LCMT2O60294 686 aaKnown RBP8.16□□□□□ -1.1
CTNND1-232ENST00000532649 SC5DO75845 299 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 SCO1O75880 301 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 NUDT7P0C024 238 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 CPMP14384 443 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 GPX3P22352 226 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 GCAP28676 217 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 PRAMEF8Q5VWM4 474 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 PRAMEF7Q5VXH5 474 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 CREB3L2Q70SY1 520 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 SGPP2Q8IWX5 399 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 LRR1Q96L50 414 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 GINS3Q9BRX5 216 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 PCDHA9Q9Y5H5 950 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 A0A1W2PPK0 400 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 BLACEA4D250 179 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 SLC22A31A6NKX4 558 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 GOSR2O14653 212 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 YY2O15391 372 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 OLFM2O95897 454 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 ZDHHC11BP0C7U3 371 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 RAB3AP20336 220 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 PCGF2P35227 344 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 LILRA3Q8N6C8 439 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-232ENST00000532649 OR7G2Q8NG99 324 aa8.16□□□□□ -1.1
CTNND1-232ENST00000532649 OR2T4Q8NH00 348 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms