RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PSMB10P40306 273 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 STAT5AP42229 794 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 TP53I3Q53FA7 332 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF627Q7L945 461 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF683Q8IZ20 524 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 OR6T1Q8NGN1 323 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 RLN3Q8WXF3 142 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 POLDIP3Q9BY77 421 aaKnown RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 SHARPINQ9H0F6 387 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 MVB12BQ9H7P6 319 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 SLC39A1Q9NY26 324 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 TRAV27A0A087WT01 109 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 SHISA3A0PJX4 238 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 C1orf226A1L170 272 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 FMO6PO60774 539 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 MVDP53602 400 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 MC2RQ01718 297 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
LTBP3-210ENST00000528516 TMEM88Q6PEY1 159 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 ATRAIDQ6UW56 229 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 MKKSQ9NPJ1 570 aaPredicted RBP16.65■□□□□ 0.26
LTBP3-210ENST00000528516 PIP5K1CO60331 668 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 SDC3O75056 442 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 HTR4Q13639 388 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF776Q68DI1 518 aaPredicted RBP16.65■□□□□ 0.26
LTBP3-210ENST00000528516 FAM26EQ8N5C1 309 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 ARRDC3Q96B67 414 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 PEX11GQ96HA9 241 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 HS3ST2Q9Y278 367 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 AK6Q9Y3D8 172 aaKnown RBP16.65■□□□□ 0.26
LTBP3-210ENST00000528516 TET1Q8NFU7 2136 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 PIKFYVEQ9Y2I7 2098 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 A8MVJ9 347 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 TMEM229AB2RXF0 380 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF593O00488 134 aaPredicted RBP16.65■□□□□ 0.26
LTBP3-210ENST00000528516 FFAR1O14842 300 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 RGS9O75916 674 aaPredicted RBP16.65■□□□□ 0.26
LTBP3-210ENST00000528516 IGLV3-27P01718 113 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 PCSK2P16519 638 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 HNRNPA1L2Q32P51 320 aaKnown RBP16.65■□□□□ 0.26
LTBP3-210ENST00000528516 SCGB2B2Q4G0G5 96 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 C12orf73Q69YU5 71 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 FOXRED2Q8IWF2 684 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 OR56B4Q8NH76 319 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 CDS1Q92903 461 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 GPER1Q99527 375 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 GPR174Q9BXC1 333 aa16.65■□□□□ 0.26
LTBP3-210ENST00000528516 RIF1Q5UIP0 2472 aaKnown RBP16.65■□□□□ 0.26
LTBP3-210ENST00000528516 TMEM129A0AVI4 362 aa16.64■□□□□ 0.26
LTBP3-210ENST00000528516 RNGTTO60942 597 aaKnown RBP16.64■□□□□ 0.26
LTBP3-210ENST00000528516 UBXN2BQ14CS0 331 aa16.64■□□□□ 0.26
LTBP3-210ENST00000528516 GSG1Q2KHT4 349 aa16.64■□□□□ 0.26
LTBP3-210ENST00000528516 SHISA6Q6ZSJ9 500 aa16.64■□□□□ 0.26
LTBP3-210ENST00000528516 OSTF1Q92882 214 aa16.64■□□□□ 0.26
LTBP3-210ENST00000528516 JSRP1Q96MG2 331 aaPredicted RBP16.64■□□□□ 0.26
LTBP3-210ENST00000528516 SLC17A9Q9BYT1 436 aa16.64■□□□□ 0.26
LTBP3-210ENST00000528516 TPSD1Q9BZJ3 242 aa16.64■□□□□ 0.26
LTBP3-210ENST00000528516 SCN2AQ99250 2005 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 FURINP09958 794 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 RBMS1P29558 406 aaKnown RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 FGF9P31371 208 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 SLC44A3Q8N4M1 653 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 L3MBTL4Q8NA19 623 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 RELL2Q8NC24 303 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 GPATCH2Q9NW75 528 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 TRAV20A0A0B4J274 112 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 A0A1W2PRQ8 180 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 MFSD2BA6NFX1 497 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 SLC9B1P1A6NJY1 282 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 FAM74A7A6NL05 159 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 DISC1C4P0D8 188 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 EMC8O43402 210 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 PRAMEF4O60810 478 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 PEX14O75381 377 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 RCBTB2O95199 551 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 ZNF888P0CJ79 500 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 NDUFV2P19404 249 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 RUNX3Q13761 415 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 FAM74A3Q4VXF1 159 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 C4orf46Q504U0 113 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 PRAMEF9Q5VWM5 478 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 OTPQ5XKR4 325 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 HBMQ6B0K9 141 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 TCTN3Q6NUS6 607 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 PM20D2Q8IYS1 436 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 JAGN1Q8N5M9 183 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 TSNAXQ99598 290 aaKnown RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 ARHGAP9Q9BRR9 750 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 TRIM2Q9C040 744 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 ZNF318Q5VUA4 2279 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 MAGEB4O15481 346 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 PPP1R3DO95685 299 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 MRPL58Q14197 206 aaKnown RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 TMEM201Q5SNT2 666 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 FAM111BQ6SJ93 734 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 MRPL43Q8N983 215 aaKnown RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 OR52E1Q8NGJ3 308 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 OR6N2Q8NGY6 317 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 SMARCD2Q92925 531 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 ACTR6Q9GZN1 396 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms