RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 H7C417 338 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 SULT2B1O00204 365 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 IGHV3-9P01782 118 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 FGF4P08620 206 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 IGHV4-31P0DP07 118 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 SESN3P58005 492 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 SPOCK1Q08629 439 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 LSM12Q3MHD2 195 aaKnown RBP14.17□□□□□ -0.14
PTPRU-210ENST00000527027 PDZK1Q5T2W1 519 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 ZNF544Q6NX49 715 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 NATD1Q8N6N6 113 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 C10orf105Q8TEF2 133 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 APH1AQ96BI3 265 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 MUS81Q96NY9 551 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 OR7D2Q96RA2 312 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 SDF2Q99470 211 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 INPP5KQ9BT40 448 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 GATA5Q9BWX5 397 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-210ENST00000527027 NMUR2Q9GZQ4 415 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 MANSC1Q9H8J5 431 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 NOSIPQ9Y314 301 aaKnown RBP14.17□□□□□ -0.14
PTPRU-210ENST00000527027 ANK2Q01484 3957 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 ZNF716A6NP11 495 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 CYP7B1O75881 506 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 C6orf47O95873 294 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 FAM153BP0C7A2 387 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 BMP4P12644 408 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 USF1P22415 310 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-210ENST00000527027 MAPK1P28482 360 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 MERTKQ12866 999 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 SKP2Q13309 424 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 ZNF141Q15928 474 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 UGT3A2Q3SY77 523 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 FAM153CQ494X1 144 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 ABLIM2Q6H8Q1 611 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 OR7E24Q6IFN5 339 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 B3GLCTQ6Y288 498 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 C10orf107Q8IVU9 208 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 DDIASQ8IXT1 998 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 EIF1ADQ8N9N8 165 aaKnown RBP14.16□□□□□ -0.14
PTPRU-210ENST00000527027 SFXN5Q8TD22 340 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 TMEM234Q8WY98 164 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTPRU-210ENST00000527027 MOAP1Q96BY2 351 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 COQ8BQ96D53 544 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 TXLNGYQ9BZA5 131 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 ATAD3AQ9NVI7 634 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 ASB6Q9NWX5 421 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 TAS2R16Q9NYV7 291 aa14.16□□□□□ -0.14
PTPRU-210ENST00000527027 A0A1W2PR80 420 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 M0R1B8 84 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 COPEO14579 308 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 GPR171O14626 319 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 LMX1BO60663 402 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 LYPLA1O75608 230 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-210ENST00000527027 CSF3P09919 207 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 PGCP20142 388 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 EFNA4P52798 201 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 LSM11P83369 360 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPRU-210ENST00000527027 CHRNB3Q05901 458 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 GPR68Q15743 365 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 GABRA6Q16445 453 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 SYT14P1Q58G82 188 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 BHLHB9Q6PI77 547 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 OR5D16Q8NGK9 328 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 SLC25A43Q8WUT9 341 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-210ENST00000527027 TWIST2Q8WVJ9 160 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 ZHX1-C8orf76Q96EF9 292 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 PPP3R2Q96LZ3 170 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 PRPF18Q99633 342 aaKnown RBP14.15□□□□□ -0.14
PTPRU-210ENST00000527027 C1QTNF6Q9BXI9 259 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 ACER3Q9NUN7 267 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 KCNE5Q9UJ90 142 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 TRAF6Q9Y4K3 522 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 PMF1-BGLAPU3KQ54 211 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 SVEP1Q4LDE5 3571 aa14.15□□□□□ -0.14
PTPRU-210ENST00000527027 TMEM233B4DJY2 109 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 PIP5K1BO14986 540 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 CFLARO15519 480 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 FCMRO60667 390 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 TRIM13O60858 407 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 PEX11AO75192 247 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 MRPL33O75394 65 aaKnown RBP14.14□□□□□ -0.15
PTPRU-210ENST00000527027 CSTAP01040 98 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 TFPIP10646 304 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 ZNF16P17020 682 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-210ENST00000527027 NTF4P34130 210 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 APOBEC1P41238 236 aaKnown RBP14.14□□□□□ -0.15
PTPRU-210ENST00000527027 GZMKP49863 264 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 PTGR1Q14914 329 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 ARIH2OSQ8N7S6 290 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 OR5AK3PQ8NH89 298 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 C19orf24Q9BVV8 132 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 MALT1Q9UDY8 824 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 GIMAP2Q9UG22 337 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 MID2Q9UJV3 735 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 SPIN1Q9Y657 262 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-210ENST00000527027 ATP23Q9Y6H3 246 aa14.14□□□□□ -0.15
PTPRU-210ENST00000527027 DUXAA6NLW8 204 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 STX11O75558 287 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms