RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 MERTKQ12866 999 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 FOXF1Q12946 379 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 DGCR6Q14129 220 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 GK3PQ14409 553 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 SLC10A1Q14973 349 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 TRAM2Q15035 370 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 ATP6AP1Q15904 470 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 COLEC12Q5KU26 742 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 RNFT1Q5M7Z0 435 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 ATG4DQ86TL0 474 aaPredicted RBP23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 TAAR6Q96RI8 345 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 RHCGQ9UBD6 479 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 OSGIN1Q9UJX0 560 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 SLC7A7Q9UM01 511 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 TESMINQ9Y4I5 508 aa23.25■■□□□ 1.31
NKX2-1-204ENST00000522719 LINC01387J3KSC0 135 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 GNGT2O14610 69 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 LDLRP01130 860 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 Q8NA96 180 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 POC1BQ8TC44 478 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 BDH2Q9BUT1 245 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 DCLRE1BQ9H816 532 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 REEP1Q9H902 201 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 DNAJC13O75165 2243 aa23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 TLN1Q9Y490 2541 aaKnown RBP23.24■■□□□ 1.31
NKX2-1-204ENST00000522719 CACNA1BQ00975 2339 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 GADD45GO95257 159 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 LYPD3O95274 346 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 CXCR1P25024 350 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 ELK4P28324 431 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 HMGA2P52926 109 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 ALDH6A1Q02252 535 aaKnown RBP23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 RAET1LQ5VY80 246 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 PCSK4Q6UW60 755 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 LINC00114Q6XXX2 140 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 YRDCQ86U90 279 aaKnown RBP23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 LRTOMTQ8WZ04 291 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 MAN2C1Q9NTJ4 1040 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 RPH3AQ9Y2J0 694 aaPredicted RBP23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 ZNF407Q9C0G0 2248 aa23.23■■□□□ 1.31
NKX2-1-204ENST00000522719 A0A087WUJ7 227 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 TMED7-TICAM2A0A0A6YYA0 188 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 ELOA3DA6NLF2 546 aaPredicted RBP23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 FKBP2P26885 142 aaKnown RBP23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 RIPK1Q13546 671 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 ELOA3BQ3SY89 546 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 ADGRG3Q86Y34 549 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 ELOA3Q8NG57 546 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 RNF217Q8TC41 542 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 HS6ST2Q96MM7 605 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 NPAS1Q99742 590 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 PRSS27Q9BQR3 290 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 SERINC1Q9NRX5 453 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 TMED7Q9Y3B3 224 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 LYVE1Q9Y5Y7 322 aa23.22■■□□□ 1.31
NKX2-1-204ENST00000522719 OR2M5A3KFT3 312 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 MGRN1O60291 552 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 RBM34P42696 430 aaKnown RBP23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 B3GALT5-AS1P59052 145 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 LY6DQ14210 128 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 RCN1Q15293 331 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 WIPI1Q5MNZ9 446 aaPredicted RBP23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 FAM180AQ6UWF9 173 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 CENPNQ96H22 339 aaPredicted RBP23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 EPYCQ99645 322 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 ZNF426Q9BUY5 554 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 LUZP4Q9P127 313 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 CHRNA9Q9UGM1 479 aa23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 SAMHD1Q9Y3Z3 626 aaKnown RBP23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 SPIN1Q9Y657 262 aaPredicted RBP23.21■■□□□ 1.31
NKX2-1-204ENST00000522719 ITPR1Q14643 2758 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 TNFRSF11BO00300 401 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 CELA3AP09093 270 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 TCEA1P23193 301 aaKnown RBP23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 CHMP24386 653 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 GCKP35557 465 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 SELENBP1Q13228 472 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 NKAIN4Q8IVV8 208 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 SIAH3Q8IW03 269 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 LILRA2Q8N149 483 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 PQLC1Q8N2U9 271 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 SFXN2Q96NB2 322 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 PKP2Q99959 881 aa23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 C6orf203Q9P0P8 240 aaPredicted RBP23.2■■□□□ 1.3
NKX2-1-204ENST00000522719 MED12Q93074 2177 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 SHISA8B8ZZ34 492 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 H0Y3Z8 333 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 ZNF208O43345 1280 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 HCN1O60741 890 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 IGHG3P01860 377 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 DNAJA1P31689 397 aaKnown RBP23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 LIMS1P48059 325 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 GFRA1P56159 465 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 FOXK1P85037 733 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 CMPK2Q5EBM0 449 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 FGD3Q5JSP0 725 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 DCST1Q5T197 706 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 HMBOX1Q6NT76 420 aa23.19■■□□□ 1.3
NKX2-1-204ENST00000522719 C3orf33Q6P1S2 294 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms