RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 DDIASQ8IXT1 998 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 CNPY4Q8N129 248 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 RFLNBQ8N5W9 214 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 SLC25A43Q8WUT9 341 aaPredicted RBP10.11□□□□□ -0.79
MRPS28-206ENST00000520946 ST8SIA1Q92185 356 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 MSI2Q96DH6 328 aaKnown RBP10.11□□□□□ -0.79
MRPS28-206ENST00000520946 MTERF3Q96E29 417 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 ZNF764Q96H86 408 aaPredicted RBP10.11□□□□□ -0.79
MRPS28-206ENST00000520946 FOXN4Q96NZ1 517 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 PRPF18Q99633 342 aaKnown RBP10.11□□□□□ -0.79
MRPS28-206ENST00000520946 ADAM19Q9H013 955 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 ANKZF1Q9H8Y5 726 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 MYOZ1Q9NP98 299 aaPredicted RBP10.11□□□□□ -0.79
MRPS28-206ENST00000520946 ATAD3AQ9NVI7 634 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 PARPBPQ9NWS1 579 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 PYCARDQ9ULZ3 195 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 AMDHD2Q9Y303 409 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 TMED5Q9Y3A6 229 aa10.11□□□□□ -0.79
MRPS28-206ENST00000520946 GOLGA8QA0A0J9YX86 632 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 LOC390937A0A1W2PQ73 354 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 SLC35F4A4IF30 521 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 GOLGA8OA6NCC3 632 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 SERINC4A6NH21 518 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 VSTM5A8MXK1 200 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 GOLGA8NF8WBI6 632 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 TBX19O60806 448 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 GLRA3O75311 464 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 KRT33AO76009 404 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 SNUPNO95149 360 aaKnown RBP10.1□□□□□ -0.79
MRPS28-206ENST00000520946 CSTAP01040 98 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 LINC00032P0C843 101 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 UBTFL6P0CB48 400 aaPredicted RBP10.1□□□□□ -0.79
MRPS28-206ENST00000520946 SDC1P18827 310 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 CDH2P19022 906 aaPredicted RBP10.1□□□□□ -0.79
MRPS28-206ENST00000520946 EDNRAP25101 427 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 MAPK1P28482 360 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 SOAT1P35610 550 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 CCT5P48643 541 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 SESN3P58005 492 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 OR2B6P58173 313 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 PRPS1P60891 318 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 PDK3Q15120 406 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 CR1LQ2VPA4 569 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 SYT14P1Q58G82 188 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 PDZK1Q5T2W1 519 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 B3GLCTQ6Y288 498 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 ZNF75CPQ92670 426 aaPredicted RBP10.1□□□□□ -0.79
MRPS28-206ENST00000520946 DNAJA3Q96EY1 480 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 LAT2Q9GZY6 243 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 OCEL1Q9H607 264 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 TBK1Q9UHD2 729 aa10.1□□□□□ -0.79
MRPS28-206ENST00000520946 ING1Q9UK53 422 aaPredicted RBP10.1□□□□□ -0.79
MRPS28-206ENST00000520946 HEATR1Q9H583 2144 aaKnown RBP10.1□□□□□ -0.79
MRPS28-206ENST00000520946 DUXAA6NLW8 204 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 ATP6V1G2-DDX39BF2Z307 99 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 AZIN1O14977 448 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 ANKRD28O15084 1053 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 SKAP2O75563 359 aaPredicted RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 URI1O94763 535 aaPredicted RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 H6PDO95479 791 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 CCNA2P20248 432 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 PRPH2P23942 346 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 FKBP2P26885 142 aaKnown RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 RYKP34925 604 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 APOBEC1P41238 236 aaKnown RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 FRKP42685 505 aaPredicted RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 ETF1P62495 437 aaKnown RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 KIAA0040Q15053 153 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 GABRA6Q16445 453 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 CCDC153Q494R4 210 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 SLC25A53Q5H9E4 307 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 EIF3MQ7L2H7 374 aaKnown RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 ZNF572Q7Z3I7 529 aaPredicted RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 C16orf62Q7Z3J2 963 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 SPATA19Q7Z5L4 167 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 C17orf78Q8N4C9 275 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 NATD1Q8N6N6 113 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 OR5P2Q8WZ92 322 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 MOAP1Q96BY2 351 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 MUS81Q96NY9 551 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 NAA11Q9BSU3 229 aaPredicted RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 PRR14Q9BWN1 585 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 RAB1BQ9H0U4 201 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 PSMC3IPQ9P2W1 217 aaPredicted RBP10.09□□□□□ -0.79
MRPS28-206ENST00000520946 MOKQ9UQ07 419 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 PTGDR2Q9Y5Y4 395 aa10.09□□□□□ -0.79
MRPS28-206ENST00000520946 IGKV3D-15A0A087WSY6 115 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 STX11O75558 287 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 CPA3P15088 417 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 PCMT1P22061 227 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 SERPINF1P36955 418 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 DNAJB13P59910 316 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 PDE7AQ13946 482 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 RFTN2Q52LD8 501 aaPredicted RBP10.08□□□□□ -0.8
MRPS28-206ENST00000520946 ATAD3BQ5T9A4 648 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 VHLLQ6RSH7 139 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 ABHD12BQ7Z5M8 362 aaPredicted RBP10.08□□□□□ -0.8
MRPS28-206ENST00000520946 OR7A2PQ8NGA2 310 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms