RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TNFSF11O14788 317 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 SCAMP2O15127 329 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 EFNA2O43921 213 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 SMPD2O60906 423 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 HSPA4LO95757 839 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 HMGN2P05204 90 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 PPP3CBP16298 524 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 DDX5P17844 614 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 FPR1P21462 350 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 SHC1P29353 583 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 ARRB2P32121 409 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 HPCAL1P37235 193 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 MECP2P51608 486 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 CTBP2P56545 445 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 CARD18P57730 90 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 POU6F2P78424 691 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 LTBQ06643 244 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 EXOC3L2Q2M3D2 409 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 KLHL26Q53HC5 615 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 HBMQ6B0K9 141 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 CDC73Q6P1J9 531 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 PRSS57Q6UWY2 283 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 ESPNLQ6ZVH7 1005 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 FKBP9P1Q75LS8 142 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 SZRD1Q7Z422 152 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 P3H2Q8IVL5 708 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 ANKS4BQ8N8V4 417 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 B4GALNT2Q8NHY0 566 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 PPP1R14CQ8TAE6 165 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 IGFBPL1Q8WX77 278 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 JADE3Q92613 823 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 COQ8BQ96D53 544 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 PPP3R2Q96LZ3 170 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 C3orf30Q96M34 536 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 KLHL15Q96M94 604 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 MECRQ9BV79 373 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 TMEM185BQ9H7F4 350 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 UBTD1Q9HAC8 227 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 EML4Q9HC35 981 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 KCNK9Q9NPC2 374 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 GLRX2Q9NS18 164 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 ZCCHC3Q9NUD5 404 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 INTS9Q9NV88 658 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 SLC17A7Q9P2U7 560 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 MCTS1Q9ULC4 181 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 COA3Q9Y2R0 106 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 KCNE3Q9Y6H6 103 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 ARHGAP21Q5T5U3 1957 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 CSPG4Q6UVK1 2322 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 NPIPB9F8W1W9 429 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ZNF195O14628 629 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 PEX11AO75192 247 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 LYPLA1O75608 230 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 SOX30O94993 753 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 SYNGR4O95473 234 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 PLGP00747 810 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 HPGDP15428 266 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ADSLP30566 484 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 LSP1P33241 339 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 SERPINB5P36952 375 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 RPL3P39023 403 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 EIF1P41567 113 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 CCT3P49368 545 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ZNF41P51814 821 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 SLC18A1P54219 525 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 FOXF1Q12946 379 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ZSCAN26Q16670 478 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 BEX5Q5H9J7 111 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 Q5PR19 223 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 C6orf136Q5SQH8 315 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 PDSS1Q5T2R2 415 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 IL23RQ5VWK5 629 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 PPP4R4Q6NUP7 873 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 CBLN3Q6UW01 205 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ZCCHC23Q6ZST2 131 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 Q71RC1 249 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 WFDC3Q8IUB2 231 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 RIMKLAQ8IXN7 391 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 LILRA2Q8N149 483 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 CIARTQ8N365 385 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 NATD1Q8N6N6 113 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ANKRD42Q8N9B4 389 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 PHOSPHO1Q8TCT1 267 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 TCP10LQ8TDR4 215 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 DYDC1Q8WWB3 177 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ROBO4Q8WZ75 1007 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 CDS1Q92903 461 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ZNF524Q96C55 264 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ARSGQ96EG1 525 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 CCL19Q99731 98 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ACTRT3Q9BYD9 372 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 HOXD1Q9GZZ0 328 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 OR10A4Q9H209 315 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 CXorf36Q9H7Y0 433 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ZDHHC2Q9UIJ5 367 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 ICAM5Q9UMF0 924 aa8.26□□□□□ -1.09
CTNNA1-221ENST00000520339 GPR52Q9Y2T5 361 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms