RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 GPATCH2Q9NW75 528 aa13.41□□□□□ -0.26
CSGALNACT1-204ENST00000517494 ATP6V1HQ9UI12 483 aa13.41□□□□□ -0.26
CSGALNACT1-204ENST00000517494 DNAJC15Q9Y5T4 150 aa13.41□□□□□ -0.26
CSGALNACT1-204ENST00000517494 NBEAL1Q6ZS30 2694 aa13.41□□□□□ -0.26
CSGALNACT1-204ENST00000517494 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
CSGALNACT1-204ENST00000517494 SERINC4A6NH21 518 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 NPIPB9F8W1W9 429 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 COPEO14579 308 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 PIP5K1BO14986 540 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 EIF4E2O60573 245 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 FAM153BP0C7A2 387 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 UBTFL6P0CB48 400 aaPredicted RBP13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 IGHV4-31P0DP07 118 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 SRD5A1P18405 259 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 USF1P22415 310 aaPredicted RBP13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 MAPK1P28482 360 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 RPL3P39023 403 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 SESN3P58005 492 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 GGTLC2Q14390 218 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 CARTPTQ16568 116 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 FAM153CQ494X1 144 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 SYT14P1Q58G82 188 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 SLC25A53Q5H9E4 307 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 C9orf135Q5VTT2 229 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 TMPPEQ6ZT21 453 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 OLIG3Q7RTU3 272 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 C10orf105Q8TEF2 133 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 C3orf49Q96BT1 292 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 ZHX1-C8orf76Q96EF9 292 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 INPP5KQ9BT40 448 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 C1orf50Q9BV19 199 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 ASB6Q9NWX5 421 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 SLC25A15Q9Y619 301 aa13.4□□□□□ -0.26
CSGALNACT1-204ENST00000517494 GOLGA8QA0A0J9YX86 632 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 GOLGA8OA6NCC3 632 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 GOLGA8NF8WBI6 632 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 LMX1BO60663 402 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PEX11AO75192 247 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CSTAP01040 98 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 BMP4P12644 408 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CRHR1P34998 444 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SKP2Q13309 424 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PTGR1Q14914 329 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 LSM12Q3MHD2 195 aaKnown RBP13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ABLIM2Q6H8Q1 611 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 IFT20Q8IY31 132 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 GSPT2Q8IYD1 628 aaKnown RBP13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 C4orf33Q8N1A6 199 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 KRTCAP2Q8N6L1 136 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ZNF563Q8TA94 476 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SFXN5Q8TD22 340 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 TMEM234Q8WY98 164 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ST8SIA1Q92185 356 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 GATA5Q9BWX5 397 aaPredicted RBP13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ATAD3AQ9NVI7 634 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 TMEM160Q9NX00 188 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 TAS2R16Q9NYV7 291 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 KCNS2Q9ULS6 477 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ALPK2Q86TB3 2170 aa13.39□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CENPVL1A0A0U1RR11 272 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ESPNB1AK53 854 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 H7C417 338 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MRPL33O75394 65 aaKnown RBP13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CHRNGP07510 517 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CSF3P09919 207 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PGCP20142 388 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CCNA2P20248 432 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 IGFBP5P24593 272 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 RYKP34925 604 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 EFNA4P52798 201 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 FOXG1P55316 489 aaPredicted RBP13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CHRNB3Q05901 458 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 FAM166AQ6J272 317 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ZNF544Q6NX49 715 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CASP12Q6UXS9 341 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MTDHQ86UE4 582 aaKnown RBP13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CLEC4FQ8N1N0 589 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 OR52E4Q8NGH9 312 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SLC25A43Q8WUT9 341 aaPredicted RBP13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MOAP1Q96BY2 351 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PPP3R2Q96LZ3 170 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SDF2Q99470 211 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PRPF18Q99633 342 aaKnown RBP13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 LAT2Q9GZY6 243 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 FKRPQ9H9S5 495 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MID2Q9UJV3 735 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MKLN1Q9UL63 735 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SPIN1Q9Y657 262 aaPredicted RBP13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PMF1-BGLAPU3KQ54 211 aa13.38□□□□□ -0.27
CSGALNACT1-204ENST00000517494 LOC100289279A0A1B0GTE1 492 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 KRT4P19013 534 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MATN1P21941 496 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 GZMKP49863 264 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 OR2B6P58173 313 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PCLAFQ15004 111 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ATP6AP1LQ52LC2 224 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 OR7E24Q6IFN5 339 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 BHLHB9Q6PI77 547 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 RNF165Q6ZSG1 346 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms