RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 PROCP04070 461 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 LINC00032P0C843 101 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 APOBEC3AP31941 199 aaPredicted RBP13.83□□□□□ -0.2
LMNA-223ENST00000515459 HPCAL1P37235 193 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 RPL3P39023 403 aaKnown RBP13.83□□□□□ -0.2
LMNA-223ENST00000515459 GGTLC2Q14390 218 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 GABRA6Q16445 453 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 CCDC153Q494R4 210 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 SYT14P1Q58G82 188 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 C17orf53Q8N3J3 647 aaPredicted RBP13.83□□□□□ -0.2
LMNA-223ENST00000515459 MZB1Q8WU39 189 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 SLC25A43Q8WUT9 341 aaPredicted RBP13.83□□□□□ -0.2
LMNA-223ENST00000515459 TMEM234Q8WY98 164 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 THUMPD3Q9BV44 507 aaKnown RBP13.83□□□□□ -0.2
LMNA-223ENST00000515459 C1QTNF6Q9BXI9 259 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 FKRPQ9H9S5 495 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 GPATCH2Q9NW75 528 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 OXSMQ9NWU1 459 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 ATP6V1HQ9UI12 483 aa13.83□□□□□ -0.2
LMNA-223ENST00000515459 ANK2Q01484 3957 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 SERINC4A6NH21 518 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 ZNF716A6NP11 495 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 VWC2LB2RUY7 222 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 NDUFS8O00217 210 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 GPR171O14626 319 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 SCAMP2O15127 329 aaKnown RBP13.82□□□□□ -0.2
LMNA-223ENST00000515459 RIPK2O43353 540 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 DNAJA2O60884 412 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 CYP7B1O75881 506 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 CHEK2O96017 543 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 BCKDHAP12694 445 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 PDLIM4P50479 330 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 SESN3P58005 492 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 MERTKQ12866 999 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 SKP2Q13309 424 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 SQLEQ14534 574 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 SPDYE7PQ495Y7 208 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 LIPNQ5VXI9 398 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 TRMT10CQ7L0Y3 403 aaKnown RBP13.82□□□□□ -0.2
LMNA-223ENST00000515459 NOA1Q8NC60 698 aaKnown RBP13.82□□□□□ -0.2
LMNA-223ENST00000515459 OR7A2PQ8NGA2 310 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 PSMA8Q8TAA3 256 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 OR5P2Q8WZ92 322 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 MSI2Q96DH6 328 aaKnown RBP13.82□□□□□ -0.2
LMNA-223ENST00000515459 ZHX1-C8orf76Q96EF9 292 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 SDF2Q99470 211 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 PIMREGQ9BSJ6 248 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 NMUR2Q9GZQ4 415 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 LAT2Q9GZY6 243 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 TUBB1Q9H4B7 451 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 MALT1Q9UDY8 824 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 TRAF6Q9Y4K3 522 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 FKBP7Q9Y680 259 aa13.82□□□□□ -0.2
LMNA-223ENST00000515459 NUP214P35658 2090 aaPredicted RBP13.81□□□□□ -0.2
LMNA-223ENST00000515459 ARFGEF3Q5TH69 2177 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 A0A1W2PPM1 405 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 TMEM114B3SHH9 223 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 PLIN3O60664 434 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 MRPL33O75394 65 aaKnown RBP13.81□□□□□ -0.2
LMNA-223ENST00000515459 CSTAP01040 98 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 ITGA5P08648 1049 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 TFPIP10646 304 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 LAMP1P11279 417 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 APEHP13798 732 aaKnown RBP13.81□□□□□ -0.2
LMNA-223ENST00000515459 PGCP20142 388 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 NR4A2P43354 598 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 PHC1P78364 1004 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 WHAMMP3Q1A5X7 153 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 LSM12Q3MHD2 195 aaKnown RBP13.81□□□□□ -0.2
LMNA-223ENST00000515459 LIPMQ5VYY2 423 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 CCDC63Q8NA47 563 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 PIGXQ8TBF5 258 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 SFXN5Q8TD22 340 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 C3orf49Q96BT1 292 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 MOAP1Q96BY2 351 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 OR7D2Q96RA2 312 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 TRMOQ9BU70 441 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 PRR14Q9BWN1 585 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 EML4Q9HC35 981 aaKnown RBP13.81□□□□□ -0.2
LMNA-223ENST00000515459 AMDHD2Q9Y303 409 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 DNAJC15Q9Y5T4 150 aa13.81□□□□□ -0.2
LMNA-223ENST00000515459 SPIN1Q9Y657 262 aaPredicted RBP13.81□□□□□ -0.2
LMNA-223ENST00000515459 URI1O94763 535 aaPredicted RBP13.8□□□□□ -0.2
LMNA-223ENST00000515459 PMS2P2O95744 297 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 C6orf47O95873 294 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 PGRP06401 933 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 CPA3P15088 417 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 NTF4P34130 210 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 APOBEC1P41238 236 aaKnown RBP13.8□□□□□ -0.2
LMNA-223ENST00000515459 CCT5P48643 541 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 SLC16A1P53985 500 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 FOXG1P55316 489 aaPredicted RBP13.8□□□□□ -0.2
LMNA-223ENST00000515459 GPR68Q15743 365 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 ZNF141Q15928 474 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 KANK2Q63ZY3 851 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 HOMEZQ8IX15 550 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 DDIASQ8IXT1 998 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 C17orf78Q8N4C9 275 aa13.8□□□□□ -0.2
LMNA-223ENST00000515459 NATD1Q8N6N6 113 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms