RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 VBP1P61758 197 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 CDK5Q00535 292 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 ZNF45Q02386 682 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 MLLT11Q13015 90 aaPredicted RBP8.76□□□□□ -1.01
MSH3-203ENST00000512531 C1orf61Q13536 156 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 IRF3Q14653 427 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 SPCS2Q15005 226 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 SPHARQ15513 63 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 LTB4RQ15722 352 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 DUSP5Q16690 384 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 PRICKLE4Q2TBC4 344 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 MINDY4Q4G0A6 757 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 FLYWCH1Q4VC44 716 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.76□□□□□ -1.01
MSH3-203ENST00000512531 FAM111BQ6SJ93 734 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 Q6ZPB1 254 aaPredicted RBP8.76□□□□□ -1.01
MSH3-203ENST00000512531 ZER1Q7Z7L7 766 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 DTX1Q86Y01 620 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 VRK2Q86Y07 508 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 PLXDC1Q8IUK5 500 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 OR4N4Q8N0Y3 316 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 ZNF527Q8NB42 609 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 SLC16A11Q8NCK7 471 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 MORN4Q8NDC4 146 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 PSD4Q8NDX1 1056 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 OR7G1Q8NGA0 311 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 AP3S1Q92572 193 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 COX4I2Q96KJ9 171 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 LRFN5Q96NI6 719 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 FCRL4Q96PJ5 515 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 IL4I1Q96RQ9 567 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 FUZQ9BT04 418 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 LMF2Q9BU23 707 aaKnown RBP8.76□□□□□ -1.01
MSH3-203ENST00000512531 TCEAL2Q9H3H9 227 aaPredicted RBP8.76□□□□□ -1.01
MSH3-203ENST00000512531 LRRN3Q9H3W5 708 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 FN3KQ9H479 309 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 ETAA1Q9NY74 926 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 MED31Q9Y3C7 131 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 MMACHCQ9Y4U1 282 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 CDH10Q9Y6N8 788 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 LRP4O75096 1905 aa8.76□□□□□ -1.01
MSH3-203ENST00000512531 A0A087WUU8 490 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 LOC100506127A0A0U1RQW1 187 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 A0A1W2PQM1 296 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 PMS2P1A4D2B8 440 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 ZNF860A6NHJ4 632 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 UNC119BA6NIH7 251 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 CYR61O00622 381 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 DUX1O43812 170 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 FGF17O60258 216 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 HCN1O60741 890 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 LDB3O75112 727 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 NKX2-2O95096 273 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 JMJD7P0C870 316 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 HPGDP15428 266 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 GLB1P16278 677 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 RPS4Y1P22090 263 aaKnown RBP8.75□□□□□ -1.01
MSH3-203ENST00000512531 LCN1P31025 176 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 GRK5P34947 590 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 TRHRP34981 398 aaPredicted RBP8.75□□□□□ -1.01
MSH3-203ENST00000512531 SLC15A1P46059 708 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 MTNR1AP48039 350 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 GPR143P51810 404 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 BMXP51813 675 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 EEF1A1P68104 462 aaKnown RBP8.75□□□□□ -1.01
MSH3-203ENST00000512531 CCL7P80098 99 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 ZNF91Q05481 1191 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 SRSF1Q07955 248 aaKnown RBP eCLIP8.75□□□□□ -1.01
MSH3-203ENST00000512531 FUT5Q11128 374 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 SYT16Q17RD7 645 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 TRIM16LQ309B1 348 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 ZNF750Q32MQ0 723 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 C14orf28Q4W4Y0 310 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 SPANXN2Q5MJ10 180 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 TMEM236Q5W0B7 351 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 TMPRSS11AQ6ZMR5 421 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 ZNF574Q6ZN55 896 aaPredicted RBP8.75□□□□□ -1.01
MSH3-203ENST00000512531 ZNF836Q6ZNA1 936 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 GDF7Q7Z4P5 450 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 KMT5CQ86Y97 462 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 RBM45Q8IUH3 476 aaKnown RBP8.75□□□□□ -1.01
MSH3-203ENST00000512531 LACC1Q8IV20 430 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 GPR135Q8IZ08 494 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 DYNC2LI1Q8TCX1 351 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 SGCDQ92629 289 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 DIO2Q92813 273 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 UFD1Q92890 307 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 NINJ1Q92982 152 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 UCN3Q969E3 161 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 SH3YL1Q96HL8 342 aaPredicted RBP8.75□□□□□ -1.01
MSH3-203ENST00000512531 LRR1Q96L50 414 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 CSF3RQ99062 836 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 CMKLR1Q99788 373 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 NUAK2Q9H093 628 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 SYNDIG1Q9H7V2 258 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 AMBNQ9NP70 447 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 INPP5EQ9NRR6 644 aa8.75□□□□□ -1.01
MSH3-203ENST00000512531 MRPS18AQ9NVS2 196 aaKnown RBP8.75□□□□□ -1.01
MSH3-203ENST00000512531 MAT2BQ9NZL9 334 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms