RNA–Protein interactions for RNA: ENST00000511496.5

LIMCH1-213, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-213ENST00000511496 IFITM10A6NMD0 228 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 IL5P05113 134 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 FGF1P05230 155 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 DLSTP36957 453 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 KCNAB1Q14722 419 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 SCGB2B2Q4G0G5 96 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 ARSIQ5FYB1 569 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 FAM111BQ6SJ93 734 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 ZNF322Q6U7Q0 402 aaPredicted RBP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 SPNS3Q6ZMD2 512 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 TTLL10Q6ZVT0 673 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 PPP1R3BQ86XI6 285 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 CLDN19Q8N6F1 224 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 LGALS14Q8TCE9 139 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 TMED6Q8WW62 240 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 FCAMRQ8WWV6 532 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 SLC22A18Q96BI1 424 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 MED8Q96G25 268 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 HSPA12BQ96MM6 686 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 CHST5Q9GZS9 411 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 SMG9Q9H0W8 520 aaKnown RBP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 GDE1Q9NZC3 331 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 KLHL9Q9P2J3 617 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 ZNF70Q9UC06 446 aaPredicted RBP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 A0A0G2JK05 382 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 BCL2L11O43521 198 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 VNN2O95498 520 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 PPIBP23284 216 aaKnown RBP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 MMP11P24347 488 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 CRABP1P29762 137 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 MAT2AP31153 395 aaKnown RBP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 HNRNPKP61978 463 aaKnown RBP eCLIP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 NHLH2Q02577 135 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 LY6KQ17RY6 165 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 ARMC12Q5T9G4 340 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 TCTN3Q6NUS6 607 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 GDPD4Q6W3E5 623 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 C6orf120Q7Z4R8 191 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 RASGEF1AQ8N9B8 481 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 SKA2Q8WVK7 121 aaPredicted RBP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 PPP1R16AQ96I34 528 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 IP6K3Q96PC2 410 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 GPA33Q99795 319 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 ACKR4Q9NPB9 350 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 PRDM5Q9NQX1 630 aaPredicted RBP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 TIMM13Q9Y5L4 95 aaPredicted RBP11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 CKAP5Q14008 2032 aa11.19□□□□□ -0.62
LIMCH1-213ENST00000511496 GBF1Q92538 1859 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 LOC100509620A0A075B734 347 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 TMEM272A0A1B0GTI8 110 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 C1orf226A1L170 272 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 NAP1L6A6NFF2 107 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 MOSPD3O75425 235 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 ATP1B1P05026 303 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 NME2P22392 152 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 TTPAP49638 278 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 STXBP1P61764 594 aaKnown RBP11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 HBA1P69905 142 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 PRKCZQ05513 592 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 HYAL4Q2M3T9 481 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 MSANTD1Q6ZTZ1 278 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 HMGN2P46Q86SG4 172 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 MTMR14Q8NCE2 650 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 BBS1Q8NFJ9 593 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 CSGALNACT1Q8TDX6 532 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 PPCDCQ96CD2 204 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 AKR1E2Q96JD6 320 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 ZNF354BQ96LW1 612 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 TMEM39BQ9GZU3 492 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 FAM124BQ9H5Z6 455 aaPredicted RBP11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 FN3KRPQ9HA64 309 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 RHOFQ9HBH0 211 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 TMEM30AQ9NV96 361 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 COMMD9Q9P000 198 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 PCDHB1Q9Y5F3 818 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 ARID1AO14497 2285 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 CENPFP49454 3210 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 PRSS47A8MTI9 375 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 ITGA10O75578 1167 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 IFNGP01579 166 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 HOXB5P09067 269 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 HOXA5P20719 270 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 AGTR1P30556 359 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 CD80P33681 288 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 ACSM2AQ08AH3 577 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 LBHQ53QV2 105 aaPredicted RBP11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 ZNF385CQ66K41 422 aaPredicted RBP11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 ACSM2BQ68CK6 577 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 PODNL1Q6PEZ8 512 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 RPTNQ6XPR3 784 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 LRRC18Q8N456 261 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 KCNRGQ8N5I3 272 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 OR8J2Q8NGG1 315 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 C1orf216Q8TAB5 229 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 POC1BQ8TC44 478 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 GAL3ST4Q96RP7 486 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 WFDC6Q9BQY6 131 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 ACBD6Q9BR61 282 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 NRSN2Q9GZP1 204 aa11.18□□□□□ -0.62
LIMCH1-213ENST00000511496 IL21RQ9HBE5 538 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 383.8 ms