RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 Q6ZPB1 254 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 RPS19BP1Q86WX3 136 aaKnown RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 KIF18BQ86Y91 864 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 BPIFB6Q8NFQ5 453 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 FANK1Q8TC84 345 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 KIAA1143Q96AT1 154 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SGTBQ96EQ0 304 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SGCZQ96LD1 299 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 FRMD6Q96NE9 622 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 TUBA1CQ9BQE3 449 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 NDEL1Q9GZM8 345 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 LIN28AQ9H9Z2 209 aaKnown RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 RASSF1Q9NS23 344 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 P4HTMQ9NXG6 502 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 TAS2R10Q9NYW0 307 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 CNOT2Q9NZN8 540 aaKnown RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 FBXL4Q9UKA2 621 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SIGLEC7Q9Y286 467 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SNX5Q9Y5X3 404 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 DPPA5A6NC42 116 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 ENO4A6NNW6 628 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 ETV2O00321 342 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-209ENST00000511426 CDC42EP2O14613 210 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 SCO2O43819 266 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 ZNF354AO60765 605 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-209ENST00000511426 PIPP12273 146 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-209ENST00000511426 ALDH3B2P48448 385 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 POLR2HP52434 150 aaKnown RBP13.87□□□□□ -0.19
SCLT1-209ENST00000511426 GTF2A1P52655 376 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-209ENST00000511426 EFNB1P98172 346 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 CRYZQ08257 329 aaKnown RBP13.87□□□□□ -0.19
SCLT1-209ENST00000511426 BORAQ6PGQ7 559 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 SMARCD3Q6STE5 483 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 RTL4Q6ZR62 310 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 TMPRSS7Q7RTY8 843 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 DTX1Q86Y01 620 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 SVOPQ8N4V2 548 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 PFN4Q8NHR9 129 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 GPR119Q8TDV5 335 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 ASB15Q8WXK1 588 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 MYDGFQ969H8 173 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 DPH1Q9BZG8 443 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 RTN4RQ9BZR6 473 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 OR52D1Q9H346 318 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 FN3KQ9H479 309 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 METTL7AQ9H8H3 244 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 C20orf141Q9NUB4 165 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 KLRF1Q9NZS2 232 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 WIF1Q9Y5W5 379 aa13.87□□□□□ -0.19
SCLT1-209ENST00000511426 ANKRD33BA6NCL7 494 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 EFCAB10A6NFE3 127 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 CLCA1A8K7I4 914 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 OIP5O43482 229 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 FAM20BO75063 409 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 JUNBP17275 347 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-209ENST00000511426 MAKP20794 623 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 GRK5P34947 590 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 PRPS1P60891 318 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 RPS18P62269 152 aaKnown RBP13.86□□□□□ -0.19
SCLT1-209ENST00000511426 COL28A1Q2UY09 1125 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 PGGHGQ32M88 737 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 TMEM236Q5W0B7 351 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 DESI1Q6ICB0 168 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 C16orf47Q6ZP98 133 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-209ENST00000511426 PRSS48Q7RTY5 328 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 OAFQ86UD1 273 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 CCDC103Q8IW40 242 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 ZNF540Q8NDQ6 660 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 OR6S1Q8NH40 331 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 ADAMTS17Q8TE56 1095 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 DUSP19Q8WTR2 217 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 NKD1Q969G9 470 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 SH3YL1Q96HL8 342 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-209ENST00000511426 TSSK6Q9BXA6 273 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 PLA2G12AQ9BZM1 189 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 DSN1Q9H410 356 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 EGLN3Q9H6Z9 239 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 FKBP14Q9NWM8 211 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 PSORS1C1Q9UIG5 152 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 ZNF337Q9Y3M9 751 aa13.86□□□□□ -0.19
SCLT1-209ENST00000511426 IRGMA1A4Y4 181 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 SLC30A4O14863 429 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 NUDT14O95848 222 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 CXCR1P25024 350 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 FKBP2P26885 142 aaKnown RBP13.85□□□□□ -0.19
SCLT1-209ENST00000511426 MST1P26927 711 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 TACR3P29371 465 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 FMO3P31513 532 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 SLC6A6P31641 620 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 SOX3P41225 446 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 CASP3P42574 277 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 NOVA1P51513 510 aaKnown RBP13.85□□□□□ -0.19
SCLT1-209ENST00000511426 QPRTQ15274 297 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 ZBED5Q49AG3 693 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 SLC25A53Q5H9E4 307 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 ISLR2Q6UXK2 745 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 LNX2Q8N448 690 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 IL22RA1Q8N6P7 574 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 OR10G3Q8NGC4 313 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 OR8D4Q8NGM9 314 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms