RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 C10orf111Q8N326 155 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 FITM2Q8N6M3 262 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 MBD3L2Q8NHZ7 208 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 CA5BP1Q8WTZ4 195 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 DNAJA4Q8WW22 397 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 WNT2BQ93097 391 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 DDIT4LQ96D03 193 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 ZHX1-C8orf76Q96EF9 292 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 NSL1Q96IY1 281 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 ZNF583Q96ND8 569 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 ZNF559Q9BR84 538 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 PRRG4Q9BZD6 226 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 TRIM8Q9BZR9 551 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 TRIM2Q9C040 744 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 C12orf10Q9HB07 376 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 ADPRHL2Q9NX46 363 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 ADA2Q9NZK5 511 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 ABCD2Q9UBJ2 740 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 UTP20O75691 2785 aaKnown RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 PCNX3Q9H6A9 2034 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 ARHGAP21Q5T5U3 1957 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 WIPF3A6NGB9 483 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CCT8L1PA6NM43 557 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CLCA1A8K7I4 914 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 M0QX08 132 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 AP3D1O14617 1153 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 DVL2O14641 736 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 OIP5O43482 229 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 DNPH1O43598 174 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 ZG16O60844 167 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CRHP06850 196 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 GLI4P10075 376 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 PNMTP11086 282 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CXCR1P25024 350 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 IFNA8P32881 189 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 SFTPDP35247 375 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 OPRM1P35372 400 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 STARP49675 285 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CARD18P57730 90 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 SRSF1Q07955 248 aaKnown RBP eCLIP8.23□□□□□ -1.097e-7■□□□□ 8.2
NUP54-207ENST00000508583 TOMM34Q15785 309 aaPredicted RBP8.23□□□□□ -1.09
NUP54-207ENST00000508583 SYT14P1Q58G82 188 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 SWT1Q5T5J6 900 aaKnown RBP8.23□□□□□ -1.09
NUP54-207ENST00000508583 C5orf46Q6UWT4 87 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 MRGPRGQ86SM5 289 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 ADGRE4PQ86SQ3 457 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CLIP4Q8N3C7 705 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CADM2Q8N3J6 435 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 LSMEM1Q8N8F7 131 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 OR5M1Q8NGP8 315 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 OR10D3Q8NH80 312 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 OR2V1Q8NHB1 315 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 POP5Q969H6 163 aaKnown RBP8.23□□□□□ -1.09
NUP54-207ENST00000508583 TUBA1CQ9BQE3 449 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 TACO1Q9BSH4 297 aaKnown RBP8.23□□□□□ -1.09
NUP54-207ENST00000508583 SFXN3Q9BWM7 321 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 POLR2J2Q9GZM3 115 aaKnown RBP8.23□□□□□ -1.09
NUP54-207ENST00000508583 POLR2J3Q9H1A7 115 aaKnown RBP8.23□□□□□ -1.09
NUP54-207ENST00000508583 PIF1Q9H611 641 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 TMEM27Q9HBJ8 222 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 GLRX2Q9NS18 164 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 RLIMQ9NVW2 624 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CMTM6Q9NX76 183 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 TMEM181Q9P2C4 612 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 CLCF1Q9UBD9 225 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 ZNF629Q9UEG4 869 aaPredicted RBP8.23□□□□□ -1.09
NUP54-207ENST00000508583 HDGFL3Q9Y3E1 203 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 FAM215AQ9Y5M1 114 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 PCNX1Q96RV3 2341 aa8.23□□□□□ -1.09
NUP54-207ENST00000508583 MED12Q93074 2177 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 SPTBN1Q01082 2364 aaKnown RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 LRRK2Q5S007 2527 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TMED7-TICAM2A0A0A6YYA0 188 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 CXCR6O00574 342 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 NME4O00746 187 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TNFSF11O14788 317 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 BCAS1O75363 584 aaPredicted RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 RCBTB2O95199 551 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 CLDN14O95500 239 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 STAMBPO95630 424 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 LGI1O95970 557 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 IL18BPO95998 194 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 PLGP00747 810 aaPredicted RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 GKN3PP0CG01 181 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TFPIP10646 304 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 HSD17B1P14061 328 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 CTSSP25774 331 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TACR3P29371 465 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 KDELR2P33947 212 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 PEX19P40855 299 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 ACAA2P42765 397 aaKnown RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 CPA2P48052 419 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 KCNJ5P48544 419 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 GSK3BP49841 420 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 RASSF2P50749 326 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 CLDN15P56746 228 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 CLDN20P56880 219 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 NUP107P57740 925 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 RAC3P60763 192 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms