RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 PLPPR2Q96GM1 343 aa11.38□□□□□ -0.59
NR1I3-225ENST00000508387 CCL19Q99731 98 aa11.38□□□□□ -0.59
NR1I3-225ENST00000508387 ACER3Q9NUN7 267 aa11.38□□□□□ -0.59
NR1I3-225ENST00000508387 NKIRAS1Q9NYS0 192 aa11.38□□□□□ -0.59
NR1I3-225ENST00000508387 SLC35A3Q9Y2D2 325 aa11.38□□□□□ -0.59
NR1I3-225ENST00000508387 MAP1AP78559 2803 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-225ENST00000508387 TMEM72A0PK05 275 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 RFXANKO14593 260 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 CYTIPO60759 359 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 LYZL6O75951 148 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 AGR2O95994 175 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 ADAP00813 363 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 IGHV3-9P01782 118 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 YES1P07947 543 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 PSMB1P20618 241 aaKnown RBP11.37□□□□□ -0.59
NR1I3-225ENST00000508387 IDH2P48735 452 aaKnown RBP11.37□□□□□ -0.59
NR1I3-225ENST00000508387 SLC18A1P54219 525 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 RAC3P60763 192 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 NKX6-1P78426 367 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-225ENST00000508387 RASGEF1BQ0VAM2 473 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 TTMPQ5BVD1 217 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 Q5PR19 223 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 MRPL2Q5T653 305 aaKnown RBP11.37□□□□□ -0.59
NR1I3-225ENST00000508387 ABLIM2Q6H8Q1 611 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 ZNF704Q6ZNC4 412 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-225ENST00000508387 Q71RC1 249 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-225ENST00000508387 VRK2Q86Y07 508 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 CIARTQ8N365 385 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-225ENST00000508387 NEUROG1Q92886 237 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 PERPQ96FX8 193 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 ZBTB18Q99592 522 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 BCO1Q9HAY6 547 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 SLCO1B3Q9NPD5 702 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 TIGARQ9NQ88 270 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 POLE3Q9NRF9 147 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 RLIMQ9NVW2 624 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 BEX4Q9NWD9 120 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-225ENST00000508387 USH1CQ9Y6N9 552 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 FREM1Q5H8C1 2179 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 ABCA4P78363 2273 aa11.37□□□□□ -0.59
NR1I3-225ENST00000508387 ZC3H12DA2A288 527 aaKnown RBP11.36□□□□□ -0.59
NR1I3-225ENST00000508387 AGAP5A6NIR3 686 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 ERLIN1O75477 346 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 SLC22A3O75751 556 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 BCHEP06276 602 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 GUSBP08236 651 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 NUDT7P0C024 238 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 GKN3PP0CG01 181 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 TFPIP10646 304 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 IDO1P14902 403 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 NTF4P34130 210 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 TAB1Q15750 504 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 BEX5Q5H9J7 111 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 SFRP5Q5T4F7 317 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 GTF2IRD2BQ6EKJ0 949 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 SLC2A7Q6PXP3 512 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 ZNF836Q6ZNA1 936 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 LRRC74BQ6ZQY2 392 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 TMPPEQ6ZT21 453 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 GTF2IRD2Q86UP8 949 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 STK32CQ86UX6 486 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 ADGRG3Q86Y34 549 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 CCDC103Q8IW40 242 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 ARFGAP2Q8N6H7 521 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 PIWIL2Q8TC59 973 aaKnown RBP11.36□□□□□ -0.59
NR1I3-225ENST00000508387 WDR60Q8WVS4 1066 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 TRNT1Q96Q11 434 aaKnown RBP11.36□□□□□ -0.59
NR1I3-225ENST00000508387 EBF4Q9BQW3 602 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 EXOSC3Q9NQT5 275 aaKnown RBP11.36□□□□□ -0.59
NR1I3-225ENST00000508387 SDR39U1Q9NRG7 319 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-225ENST00000508387 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-225ENST00000508387 KLHL9Q9P2J3 617 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 CHRNA9Q9UGM1 479 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 EDARQ9UNE0 448 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 GPR52Q9Y2T5 361 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 CHST2Q9Y4C5 530 aa11.36□□□□□ -0.59
NR1I3-225ENST00000508387 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
NR1I3-225ENST00000508387 PRR14LQ5THK1 2151 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 ZNF716A6NP11 495 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 SULT2B1O00204 365 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 UBDO15205 165 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 SMPD2O60906 423 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 PABPC4LP0CB38 370 aaKnown RBP11.35□□□□□ -0.59
NR1I3-225ENST00000508387 NR2F1P10589 423 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 IMPDH2P12268 514 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 PPP3CBP16298 524 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 HOXB9P17482 250 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-225ENST00000508387 IGHV1-2P23083 117 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 OR3A2P47893 321 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 FOXG1P55316 489 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-225ENST00000508387 AGBL2Q5U5Z8 902 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 AP1ARQ63HQ0 302 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 GRINAQ7Z429 371 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 C10orf111Q8N326 155 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 SLC43A2Q8N370 569 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 TRIML2Q8N7C3 387 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 LILRB1Q8NHL6 650 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-225ENST00000508387 IGFBPL1Q8WX77 278 aa11.35□□□□□ -0.59
NR1I3-225ENST00000508387 TMEM234Q8WY98 164 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms