RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 HMGN2P05204 90 aaKnown RBP6.87□□□□□ -1.31
HMGCR-206ENST00000508070 KRT16P08779 473 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 TACSTD2P09758 323 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 GIFP27352 417 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 NTF4P34130 210 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 SERPINF1P36955 418 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 COMPP49747 757 aaPredicted RBP6.87□□□□□ -1.31
HMGCR-206ENST00000508070 CLK1P49759 484 aaKnown RBP6.87□□□□□ -1.31
HMGCR-206ENST00000508070 CHN2P52757 468 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 SLC16A1P53985 500 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 FOXA1P55317 472 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 SESN3P58005 492 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ZSWIM7Q19AV6 140 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 FAM174BQ3ZCQ3 159 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ABLIM2Q6H8Q1 611 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ANKRD26P1Q6NSI1 321 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 CDC73Q6P1J9 531 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 DEF8Q6ZN54 512 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 SLC46A3Q7Z3Q1 461 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 C3orf56Q8N813 242 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 RFWD2Q8NHY2 731 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 PIGXQ8TBF5 258 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ADAMTS15Q8TE58 950 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 JADE3Q92613 823 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 CDS1Q92903 461 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ZNF524Q96C55 264 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 FAM120BQ96EK7 910 aaKnown RBP6.87□□□□□ -1.31
HMGCR-206ENST00000508070 CCT7Q99832 543 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 VRK1Q99986 396 aaPredicted RBP6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ACTRT3Q9BYD9 372 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 LAT2Q9GZY6 243 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 RAB1BQ9H0U4 201 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 GSTO2Q9H4Y5 243 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ANKZF1Q9H8Y5 726 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ZCCHC3Q9NUD5 404 aaKnown RBP6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ACER3Q9NUN7 267 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 C1orf109Q9NX04 203 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 UPB1Q9UBR1 384 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 CCL27Q9Y4X3 112 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 SPIN1Q9Y657 262 aaPredicted RBP6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ANK2Q01484 3957 aa6.87□□□□□ -1.31
HMGCR-206ENST00000508070 ARFGEF3Q5TH69 2177 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 NPIPA5A0A0B4J1W7 369 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 TMEM89A2RUT3 159 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 SERINC4A6NH21 518 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 NPIPA7E9PJI5 369 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 ATP6V1G2-DDX39BF2Z307 99 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 ANKRD28O15084 1053 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 KCNAB3O43448 404 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 LILRA1O75019 489 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 PDE5AO76074 875 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 URI1O94763 535 aaPredicted RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 SNUPNO95149 360 aaKnown RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 VENTXO95231 258 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 PMS2P2O95744 297 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 GSTA1P08263 222 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 ITGA5P08648 1049 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 NPIPA8P0DM63 369 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 UROSP10746 265 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 UBL4AP11441 157 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 PGCP20142 388 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 APOBEC1P41238 236 aaKnown RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 MAGEA8P43361 318 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 ASMTP46597 345 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 CCT3P49368 545 aaKnown RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 IDH3GP51553 393 aaPredicted RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 CCR4P51679 360 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 DVL1P1P54792 670 aaPredicted RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 FOXG1P55316 489 aaPredicted RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 SCGB2A2Q13296 93 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 PDE7AQ13946 482 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 LASP1Q14847 261 aaKnown RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 EFNB3Q15768 340 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 ZNF385BQ569K4 471 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 SYT14P1Q58G82 188 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 DCST2Q5T1A1 773 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 KLHL24Q6TFL4 600 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 R3HCC1LQ7Z5L2 792 aaKnown RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 CNPY4Q8N129 248 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 NATD1Q8N6N6 113 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 CCNYL1Q8N7R7 359 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 ZNF614Q8N883 585 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 NEU4Q8WWR8 484 aaPredicted RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 OTUB1Q96FW1 271 aaPredicted RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 BOD1Q96IK1 185 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 FCRL1Q96LA6 429 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 SOX7Q9BT81 388 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 THUMPD3Q9BV44 507 aaKnown RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 BPESC1Q9GZL8 116 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 QRSL1Q9H0R6 528 aaKnown RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 OCEL1Q9H607 264 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 OBP2BQ9NPH6 170 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 SIRT3Q9NTG7 399 aaPredicted RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 FAF1Q9UNN5 650 aaPredicted RBP6.86□□□□□ -1.31
HMGCR-206ENST00000508070 MOKQ9UQ07 419 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 TRAPPC4Q9Y296 219 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 HDGFL3Q9Y3E1 203 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 TRAF6Q9Y4K3 522 aa6.86□□□□□ -1.31
HMGCR-206ENST00000508070 PCDHB14Q9Y5E9 798 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms